Paenibacillus graminis: PGRAT_10880
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Entry
PGRAT_10880 CDS
T03325
Name
(GenBank) alpha amylase
Organism
pgm
Paenibacillus graminis
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Gene cluster
GFIT
Motif
Pfam:
CBM_25
Alpha-amylase
CBM_20
RGI_lyase
fn3
CBM53
AMPK1_CBM
A_amylase_dom_C
Motif
Other DBs
NCBI-ProteinID:
AIQ68068
UniProt:
A0A089M987
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Position
2573044..2576103
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AA seq
1019 aa
AA seq
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MKRKLWLVPVMITSIILSITANLFVLPPTQVEAASIGTVTENDTIYQIMVDRFNDGDTSN
NATGAAIRYGETSEEDFRYMKGGDWQGVIDKLPYIHNMGYTAIWISPVAEPQVTSRDNNG
TGKNTAYHGYNVKNPNAANPYFGTKEKLKELVDSAHALGIKVIIDVVPNHIGDYMLGNQA
YYDIPGLQPAAPFNNPAWYHHNGDINWSLVDGRYDQWAQDYMENHDLGGLDDIDLDVPAA
KQAIFSSIKGWFDYTGADGARVDAAKLIKPTDIGELQNLLGVNTFGENFDGNAEFVSRWV
GNNKEWGMLDFPLFFSVLNSFAYGQSFDSNIKSTLAQDSYYNGNANHMVTFIDNHDRNRF
LTEAGGNVDKMQNALSFIFTVRGTPVVFQGTEQNKGNGNGQIMTGGIADTWNRWSMVKRD
AGGNVLENYFNENSSTYKHIAKLNEIRKNNPALRTGTQREMWSAQNLYAFSRRIDSGTNV
GQEVISVFSNASGGSQTVTLPLRAESTLTAGTVLVNQLNTSDTVTVQSGGATGKQITVTV
GANSAKIYSKTQPVVDTVAPSVPSNVTAAVQNASSVLVNWTASTDAVGVTGYEIFRNGVK
IGTSATTSYTDNAVASQTNYSYTVKAFDAAGNLSALSAAALVTTPAGNNVTIYYKQGYTT
PYIHYRPVGGTWTTAPGLAMPAAEVSGYNKITINIGSATQLEAAFNNGSGTWDSNGGSNY
LFGTGTWTYTPTGNIKSGGPVTPTATPTATPTATTTPTPTPTATATPTATPTATPTATTT
PTPTPTATATPTATPTATPTATPTATPTATPTATPTATPVGNSVTIYYKNTAFTNSYIHY
KLDGSAVWTTSPGEQMQSSSYTGYKAATIQLGSAAGLTAAFNNGSGIWDNNGGSNYHFGA
GTWSLVNGSIAAGEPQADSVTFRVSVPGTTPANDPLYLTGSFNSWNAADPAYQLTKGSDG
VYSVTLSLPAGTAVQYKITRGSWATVETSSSGADIANRTLTPAGGAQTVNLTVQRWKDQ
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaaactatggcttgttccggttatgattacgtccattattctgtctattacg
gctaatttgtttgtgcttccacctacacaggttgaggcagccagcattggtactgttact
gaaaatgacacgatttatcaaattatggtagatcgcttcaatgatggggatacctccaat
aatgctacgggtgccgctatccgctacggcgaaacctcggaggaggatttccgatatatg
aagggcggcgattggcagggggttatagacaagctcccctatattcataacatggggtat
accgcgatttggatttcaccggtggcagaaccgcaggtgacgagccgtgacaacaacggc
acaggaaaaaacacagcctaccacggttacaatgttaagaaccccaatgcggccaatcct
tactttggaaccaaagaaaagcttaaggaacttgtggattccgcgcatgcgctcggtata
aaagtcattatcgacgttgtgccgaatcacatcggggactatatgctgggaaatcaggct
tattacgatatcccaggactgcagcccgcagcaccgttcaataatccggcctggtatcac
cataatggcgatattaactggtcactggttgacggaagatatgatcaatgggctcaggat
tatatggagaatcacgatcttggcgggctggatgatatcgatcttgatgttcctgcagcc
aaacaggcaatattcagctccattaaagggtggtttgactacacgggggcggacggtgcg
cgcgtggatgccgccaagctgatcaagccgacggatattggtgaactccagaacctcctg
ggagttaatacgtttggtgagaattttgacggcaatgccgaatttgtctcccgctgggta
ggcaacaacaaggagtggggcatgctggatttcccgctgttcttctcggtgttgaacagt
ttcgcttatggacagtcctttgactccaacattaagagcacacttgctcaggattcttat
tacaacggaaatgcgaaccatatggttacctttatcgataatcatgaccgcaaccgcttc
ttgacggaagctggaggcaatgtagacaaaatgcagaacgcattgtcctttatctttaca
gtccgtggaacaccggtagtttttcagggtactgaacaaaataaaggcaacggcaacggc
cagattatgacaggcggaatcgccgatacttggaaccgctggtcgatggtgaagcgggat
gcgggcggcaatgttttggagaactattttaatgagaattccagcacttataagcatatt
gccaaactgaatgaaatccgcaaaaataacccggcgctgcgcacaggcacccagcgtgaa
atgtggtcagcccagaatctgtatgccttctcgcgccgtatagacagcggaaccaatgtg
ggacaggaagtcatttctgtgttcagcaatgcatccggcggctcacagacggttacgctt
ccgctgcgtgcagaaagcaccctaactgcaggaacagtcctagttaaccaactaaatact
tccgacacggtgactgtgcagtcaggtggtgcaaccggcaagcaaattaccgtaacagtg
ggagcgaattcagctaaaatctattccaaaacacagccggtagtagataccgtggctccg
tctgttccaagcaatgtaacagccgccgtgcagaacgcatccagtgtgcttgtcaattgg
acagcttctactgatgccgtcggggttaccggttatgaaattttccgtaatggagtcaaa
atcggcacatctgcaaccacatcgtatacagataatgctgtggcatcgcagaccaattac
agctatacggtaaaagcttttgacgccgcagggaacctgtcggctctcagcgcagcggcg
ctggtgaccactcctgccggaaataatgtaacgatctattacaagcaaggctacactaca
ccttacattcactaccgtcctgttggcggaacctggacgacagcacccggactggctatg
ccagcagccgaggtgtccggctataacaagatcacgatcaatatcggctccgccacccag
ttggaggccgcttttaacaatggcagcggcacctgggacagcaacggcgggagcaactat
ctgtttggcaccggcacctggacctatacaccgaccggaaatatcaaatcgggcggaccg
gtgacaccaacggccacaccaacagccacgccgactgcgacaaccacaccaacgccgaca
ccgacagcaacggctacgccaacggccacaccaacagccacgccgactgcgacaaccaca
ccaacgccgacaccgacagcaacggctacgccaacagccacaccaacggcaacgccaaca
gcgacgccgacagccacaccaacggcaacaccgactgctacacctacagcgacacctgtt
ggcaattcagtgaccatttattacaagaacacagcatttacgaactcctatattcattat
aagctggacggttcggcagtatggaccacttcgccgggagagcagatgcagtcatcatct
tacacgggctataaggcagctacgatccaactgggcagtgccgcaggcctgaccgccgcc
tttaacaatggcagcgggatctgggacaacaatggcggcagcaattatcactttggagca
ggcacgtggagcctggtgaacggcagcattgcagcaggagaaccgcaggcggacagcgtg
actttccgggtgagcgtgccgggcacaacccctgcaaacgatccgctgtacttaaccggc
agcttcaacagctggaacgcagcagaccctgcataccaattgaccaaaggcagcgacgga
gtctattccgtcacattgagcctgcccgcaggcacggcggtgcaatacaagatcacacgc
ggaagctgggctacagtggagaccagctcaagcggtgcggatattgcgaaccggacgctg
acaccagccggaggagcgcagactgtaaacctgaccgtacagcgctggaaggatcaataa
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