Paenibacillus graminis: PGRAT_10905
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Entry
PGRAT_10905 CDS
T03325
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm03030
DNA replication
pgm03410
Base excision repair
pgm03420
Nucleotide excision repair
pgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGRAT_10905
03410 Base excision repair
PGRAT_10905
03420 Nucleotide excision repair
PGRAT_10905
03440 Homologous recombination
PGRAT_10905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgm03032
]
PGRAT_10905
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_10905
Enzymes [BR:
pgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGRAT_10905
DNA replication proteins [BR:
pgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PGRAT_10905
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PGRAT_10905
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGRAT_10905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AIQ68073
UniProt:
A0A089M990
LinkDB
All DBs
Position
2581142..2583814
Genome browser
AA seq
890 aa
AA seq
DB search
MDKLILIDGNNIIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPTHMIVAFDAG
KITFRHEGYEDYKGGRQKTPPELSEQFPMLKELLRNLGVPQFEIDGYEADDIIGSISREA
DEAGRQVMIVSGDKDMLQLASEHTTVALVRKGVTEVEMYGPQQIRDKYDLTPQQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLQQFGSVEGVLAGTDELKGKMKEKLEEHADSAIMSKK
LATIYREVPLEHAWEDMVFTGIRSDTAGPALAKLEFKSLLERLSLNAYAPAGGNGEAGNE
TVEAAVLDITIVHEAELPDLIAALPDISALHVESNGENPHRAEVIGIGLSSPERHYFVPF
EVLKSPAAVKLRDWLGDEKAPKSGYDLHRADLALHWQGIAFAGAANDVQLAAYLLDPTEA
NQNLYDLTAKYGLPRLSPDEEVFGKGAKYKIPELEILGNHVARKSATVLGIVQKQQQELT
DTDMTGLFVDLEMPLSRILADMEKQGIAVNKEDLIDLGKEFEAQISKLVADIYAICGTEF
NLNSPKQLGEILFVKLGLPVVKKTKTGYSTDAEVLEKLAPYHDAVRLILQYRTIAKLQST
YVEGLLKEISPDTGKVHTFYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKIFVPSEPG
WSILAADYSQIELRVLAHISGDERMKEAFVEDMDIHTKTAMDVFGVSADQVDSNMRRSAK
AVNFGIVYGISDYGLSQNLNISRKEASQFIEQYFEVFKGVRRYMDEIVVEARKQGYVTTL
LERRRYLPEINAKNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDKALYERGLRSRMLL
QVHDELVFEVPEDELELMKTLLPEVMAGALKLSVPLKAEVSYGSNWYEAK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagttgattcttatagatggcaataacattatttaccgcgcattttttgcaatg
ccgccgctgacgaataccgcagggcagcagacgaacgcagtgtatggatttacgactatg
ctgctgcggttaattgaagagcataagcctacccatatgattgttgcgtttgatgcgggg
aagatcacgttccggcatgaggggtatgaagactataaaggcggccgccagaagacgccg
cctgagctctccgaacaattcccgatgctgaaggagctgctgcggaatctgggtgtgccg
cagtttgaaattgacggctacgaagccgatgatatcatcggcagcatctcccgcgaggcg
gacgaggccggacggcaggtcatgatcgtgtccggggacaaggatatgcttcagctggct
tcagagcatactacggtggctttggtgcgcaaaggggttaccgaagtcgaaatgtacgga
ccccagcagatccgtgacaagtatgatctgacaccgcagcagatcattgaccttaaaggt
ctgatgggcgatgccagcgacaatatccccggtgtaccgggcgtaggtgagaaaacagcg
ctgaagctgctgcagcagttcgggtcggtggagggcgtattggccggaacggatgaactg
aaggggaagatgaaggagaagctcgaggagcatgccgacagtgccatcatgagcaagaag
ctggcaacgatttaccgtgaggttccactggaacacgcctgggaggatatggtcttcacc
ggaatccgcagcgatactgccggtccggcgctggctaagctggaattcaaatccttgctg
gaacgcctgtcgctgaacgcgtatgctcctgcaggcgggaacggcgaagctggcaacgaa
accgtggaggctgctgtgctggacatcaccattgtccacgaagcagaactgccggacctg
attgccgctttgccggacatttctgcgctgcatgtcgagtctaacggcgagaatccgcac
cgcgctgaagtgatcggcataggcttgtcctctccagagcggcactacttcgtgccgttt
gaagtacttaagagtcctgcagcggtgaagctgcgggattggctgggagatgagaaggcg
ccgaagagcggctatgatctgcaccgtgcagatctggcgctgcactggcaggggattgct
tttgccggagcggctaatgatgttcaactggctgcatacctgctggacccgacggaagcc
aaccagaatctgtacgaccttacagccaaatatggcctgccccgcttgtctccggatgaa
gaggtgttcggcaaaggcgccaaatataaaatacctgagcttgagattctgggcaatcat
gtcgcccgcaaaagcgccactgtgcttggcatcgtacagaagcagcagcaggagttgacg
gacacggatatgactggcttgttcgttgatctggaaatgccgctgtcgcgcattctggcc
gatatggagaagcagggaattgccgtgaataaagaagatttgatcgacctcggcaaggaa
tttgaggcgcagatttctaagctcgtagcggatatttatgcgatttgcggtaccgagttc
aacctcaactctccgaagcagctgggggaaatcctgtttgtgaagctgggccttccagtg
gtgaagaagaccaaaacaggctattccacggatgccgaggtgctggagaagctggctcct
taccatgatgcagtccggttaattctgcaataccgcaccattgccaaacttcagtcgacc
tacgtggaaggcctgctcaaggaaatttccccggataccgggaaggtgcatacgttctac
cgccagaccattgcggcaaccggacgtctcagcagccagtttccgaatttgcagaatatt
ccgatccggctggaggaaggccgcaaaatccgcaaaatctttgtaccctccgagcccggc
tggtcgattctggcagcggattattcgcagattgaactgcgggtgctggcgcatatttcc
ggcgacgagcggatgaaggaagcttttgtggaggatatggatattcacacaaagactgcg
atggatgtattcggtgtcagcgccgatcaagtggacagcaacatgcgccgttctgccaaa
gcggtcaacttcgggattgtgtacggcatcagtgattacggcctgtcgcagaacctgaat
atttcgcgtaaggaagcttcgcagttcattgagcagtatttcgaagtattcaagggagta
cgccgctatatggatgagattgtggtggaagcacgcaagcagggctatgtcactacattg
ctggagcgccgccggtatttgccggagatcaacgcgaagaactttaacttgcgctctttt
gccgagcggacagccatgaataccccgatccagggaacggcagcggatattattaagctg
gctatggtccacatggacaaggcgctgtatgaacgcggactgagaagccggatgctgctg
caggtgcatgatgagctggtattcgaggtgccggaagatgagctggagctgatgaaaaca
ctgttgccggaggttatggcaggcgctttgaagctttctgtaccgcttaaggcggaggta
agttatggcagcaactggtatgaagcgaaatag
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