Paenibacillus graminis: PGRAT_21750
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Entry
PGRAT_21750 CDS
T03325
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PGRAT_21750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_21750
Enzymes [BR:
pgm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PGRAT_21750
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PGRAT_21750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF2802
DUF5667
KxDL
Motif
Other DBs
NCBI-ProteinID:
AIQ69972
UniProt:
A0A089M9Q0
LinkDB
All DBs
Position
complement(4822498..4822761)
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AA seq
87 aa
AA seq
DB search
MAKEAELELDFEGAMERLEEIVRELEHGDVPLEKAIDLFQQGMKLSQLCGSKLEQVERKI
EMITEMDGELRKKPFGARLEGDSDEPV
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaagctgaattggaattggattttgaaggagctatggagcggctggaagaa
atcgtgcgggagctggagcacggcgacgttcccctggagaaggcaatcgatttgtttcag
cagggcatgaagctctcccagctgtgcgggagcaagctggaacaggtagaacgcaaaatc
gaaatgatcaccgagatggacggcgagctgcgcaagaaaccgttcggtgcccggctggaa
ggtgacagtgatgagcccgtttga
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