Paenibacillus graminis: PGRAT_24820
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Entry
PGRAT_24820 CDS
T03325
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pgm
Paenibacillus graminis
Pathway
pgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PGRAT_24820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_24820
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PGRAT_24820
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PGRAT_24820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
AIQ70495
UniProt:
A0A089MDQ9
LinkDB
All DBs
Position
complement(5465993..5466748)
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AA seq
251 aa
AA seq
DB search
MLYRVEGIVIRSMDYGEGNAIITLCTENAGKVGVLVRGAKKVKSRHAALIQLFTTGEFVF
FRNNGGLGTLNAGEITKSHHPLREDLVKAAYASYACELLDRVLHDEETGSFWFRQLTACL
NALEEDKEPGIIINVFEMKILQAAGYGPQLDNCIVCGLDKPDEELRVSPRLGGVLCRSCR
HNDPPAMEISPRALKLLRLFAALDLTRLGNVDVKEGTRAELKKIMRAFMDHQLGLKLKSQ
NFLDQLDKYNI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgctatacagggtggaagggatcgtcatccgcagcatggactacggcgaggggaacgcg
attattacgctttgcaccgagaacgccggcaaagtaggcgtcctcgtacgcggggccaaa
aaagttaaaagccgccatgctgccctgatccagctgttcactaccggggaatttgttttt
ttccgcaacaatgggggactcggaacactgaatgccggtgaaattacgaagtcccatcat
ccgctgcgggaggatctggtcaaggccgcttatgcttcatatgcctgcgagctgcttgac
cgtgtacttcatgatgaggagaccggcagtttttggttccgccagctcacagcctgtcta
aatgcgctagaggaagataaggagcccggcatcattataaatgtctttgagatgaaaatt
cttcaggcggcagggtacgggccgcagctggacaactgtatagtttgcggtctggacaag
ccggatgaggaactgcgggtaagtccccgccttgggggcgtgctctgccgcagctgcagg
cataatgatcctcctgccatggagatctctcctcgcgcgcttaagctgctgcgcttgttc
gctgcgcttgatctcacaaggctaggcaatgtggatgtgaaggagggcacccgtgctgaa
cttaaaaagatcatgcgggcctttatggaccatcagctggggctgaagctgaagtcgcag
aatttcctcgaccagcttgataaatacaatatttga
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