Paenibacillus graminis: PGRAT_25475
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Entry
PGRAT_25475 CDS
T03325
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PGRAT_25475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_25475
Enzymes [BR:
pgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGRAT_25475
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PGRAT_25475
RecFOR pathway proteins
PGRAT_25475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
nSTAND3
AAA_22
AAA_14
NB-ARC
RNA_helicase
NTPase_1
AAA_18
TsaE
AAA_24
AAA_3
Rad17
Sigma54_activat
Resolvase
Bac_DnaA
Sigma54_activ_2
AAA_2
DUF815
AAA_17
AAA_28
AAA_25
Torsin
NACHT
ABC_tran
AAA_19
IstB_IS21
ATPase_2
AAA_33
bpMoxR
RsgA_GTPase
Parvo_NS1
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AIQ70614
UniProt:
A0A089NND6
LinkDB
All DBs
Position
complement(5627824..5628831)
Genome browser
AA seq
335 aa
AA seq
DB search
MDDRIISANLMMDEQAVELSLRPRYLGEYIGQNQVKENLKIYIEAAKMRSEALDHVLLYG
PPGLGKTTLANIIANELGVNLRTTSGPAIERPGDLAALLTNLQQGDVLFIDEIHRLHRTV
EEVMYPAMEDFALDIMIGKGPSARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVVSRLE
YYTIDELSFIVSRNAELLGIEILGDAAEEIALRSRGTPRIANRLLKRVRDFAQVRGDGII
TPEIAGESLKMLQVDPRGLDSIDHKMLHSMISSFRGGPVGLDTIAATIGEESQTIEDVYE
PYLLQIGFLQRTPRGRVVTPAAYQHLGLPLPPQPQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccggattatatcggctaacctgatgatggacgagcaggcggtggaattaagt
ctgcgcccccgctatctgggagagtatatcggacagaaccaggttaaagagaatctgaaa
atttatatagaagctgccaaaatgcgcagcgaagcgctggaccatgtgctgctgtacggg
cctcccgggctgggtaaaacgacactcgcgaatattatcgccaatgagcttggtgtgaac
ctcaggacaacatccgggcctgccattgagcggcccggcgatctggccgcgctgctgacc
aatcttcagcagggcgatgtcctgttcattgatgagatccaccggctgcaccggacggtg
gaagaggtgatgtatccggcgatggaggatttcgcgctggatattatgatcggcaagggt
ccgagcgcccgctcggtacgactggacctgccgccctttacgctaatcggcgccactacc
cgcgccgggctgctgtctgcgccgctgcgtgaccgcttcggtgtggtcagccggctggag
tattatacgattgacgagctgagcttcattgtttcccgcaatgccgaactgctcggcatt
gagattctgggcgatgctgcagaagagatcgctttgcggtcccggggaactccgcggatt
gccaaccgcctgctgaagcgggtccgcgatttcgcgcaggtgcgcggcgacgggatcatt
acgccggagattgccggagaatcgctgaagatgctccaggtggacccgcgcggactggac
agcatcgatcacaagatgcttcattccatgatcagttccttccgcggcggacctgtggga
ctggataccatagctgcgacgatcggagaagagagccagaccattgaggatgtatatgag
ccttacctgctgcagattggatttctgcagcggacgccgcgggggagagttgtgactcct
gccgcttatcagcatttgggccttccgcttcctccgcagccgcaataa
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