Paenibacillus graminis: PGRAT_25480
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Entry
PGRAT_25480 CDS
T03325
Name
(GenBank) ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
pgm
Paenibacillus graminis
Pathway
pgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PGRAT_25480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_25480
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PGRAT_25480
RecFOR pathway proteins
PGRAT_25480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RecR_HhH
RuvA_C
HHH
IMS_HHH
HHH_8
HHH_3
Cdd1
Motif
Other DBs
NCBI-ProteinID:
AIQ70615
UniProt:
A0A089ME22
LinkDB
All DBs
Position
complement(5628861..5629484)
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AA seq
207 aa
AA seq
DB search
MIDYLRGPVVHLEPEYVVVDVQGIGYRVFCPNPYAFAKLEGPVTVYIHYQTREDATLLFG
FPTREEQKLFRKLIEVSGIGPRVALGILTGGTPDQLISAIYQENITFLTKLPGIGKKTAQ
RMILDLRDKLDGLSAVSMQTGLFAVAAEAQAAEEAMPWEEARDGLRALGYTEAELDRVWL
TMKKEGADTGPVDVLMKKALGLLYIAK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgatagattacttaagaggtccggttgtccatttggagccggaatatgtggtggtggat
gtccagggcataggataccgggtgttctgcccgaatccgtatgcttttgccaagttggag
gggccggtgacggtctacattcattaccagacacgcgaggatgctaccctgctcttcggg
ttcccgacaagagaagagcagaagctgttccgcaagctgattgaggtatccggcattggc
ccgcgcgtagccctggggattctgaccggcggaacaccggatcagctgatctccgcgatt
taccaggagaatatcaccttcctgaccaagctcccggggatcggcaagaagaccgcccag
cggatgattctggatctgcgggacaagctggacgggttgagcgcggtatccatgcagaca
ggattgtttgctgtagcggcagaagcccaggcggccgaagaagcaatgccttgggaggaa
gcgcgggacggcctgagggctcttggatataccgaagccgagctggaccgggtatggctg
accatgaagaaggaaggcgccgatacaggtcccgttgatgtgctgatgaagaaggcgctg
gggctgctgtatatagccaaatag
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