Paenibacillus graminis: PGRAT_25950
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Entry
PGRAT_25950 CDS
T03325
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00521
Streptomycin biosynthesis
pgm00523
Polyketide sugar unit biosynthesis
pgm00541
O-Antigen nucleotide sugar biosynthesis
pgm01100
Metabolic pathways
pgm01110
Biosynthesis of secondary metabolites
pgm01250
Biosynthesis of nucleotide sugars
Module
pgm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PGRAT_25950
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PGRAT_25950
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PGRAT_25950
Enzymes [BR:
pgm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PGRAT_25950
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AIQ70688
UniProt:
A0A089MGQ9
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All DBs
Position
complement(5726600..5727160)
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AA seq
186 aa
AA seq
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MKLTETALPGVVIVEPAVFGDHRGWFMETFSDAKFREHGIDISFVQDNQSYSAVKGTLRG
LHYQLNPKAQTKLIRCTRGVIYDVAVDIRKGSPTYSKWFGLELSAENKKQLLVPKGFAHG
FMTLTEDVEVQYKCDELYAPECDGGILWNDPAIGVEWPIHVAPVLSAKDEKAPLLKDANL
NFTYGG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgacggaaacagcacttcctggtgtagttatcgttgaaccggcagtatttggt
gaccatcgcggatggtttatggaaacattcagtgatgcgaaatttagggaacatggaata
gatatttcttttgtccaggataaccaatcgtattctgctgtcaaaggaactctaagagga
cttcattatcaattgaatcctaaagcgcagacgaagcttatccgttgtacacgtggagtc
atctacgatgtggctgtagatattagaaaaggcagccccacgtatagcaagtggtttggt
ctggagttaagtgcggagaacaagaagcagttgctggttccgaaggggtttgcacatgga
ttcatgacgctgacagaagatgttgaggttcaatataaatgtgatgagctgtatgccccg
gaatgtgacggtggcattctgtggaacgatcccgccattggtgttgaatggccgatacat
gtggccccggtactatctgccaaggatgaaaaggcccctttgttgaaggatgcgaatttg
aattttacatatggcggctag
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