Paenibacillus graminis: PGRAT_26620
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Entry
PGRAT_26620 CDS
T03325
Name
(GenBank) UDP-N-acetylglucosamine 4,6-dehydratase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00520
Amino sugar and nucleotide sugar metabolism
pgm00541
O-Antigen nucleotide sugar biosynthesis
pgm01100
Metabolic pathways
pgm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
PGRAT_26620
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PGRAT_26620
Enzymes [BR:
pgm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
PGRAT_26620
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
3Beta_HSD
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
KR
NmrA
adh_short
Shikimate_DH
Sacchrp_dh_NADP
Semialdhyde_dh
F420_oxidored
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AIQ70800
UniProt:
A0A089MEK6
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All DBs
Position
complement(5871259..5872245)
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AA seq
328 aa
AA seq
DB search
MFNNKRILVTGGTGSWGHELIRQLLPQNPKEIVIFSRSESAQVAMSREYEDSRLSFIIGD
IRDKDALVAACRGIDYVFHLAALKHVPVCEDQPYEALKTNVVGTQNVIEAAIASNVEKAI
YISTDKAANPSNFYGMTKAIGEKLFVYANLLGSQTRFVTVRGGNVLGTNGSVVHLFMKQI
KDKGQVRITDMKMTRFFFTLRDAITLLFKASEVSLGGEIFVMTMPTCRIVDLAEVLIEAS
GRRDVSMIEAGIRPGEKIHEILMSDFESQTTVVYDEQYLVILPTLDMPELKAHYSRYPHV
SFNSFSSENNLMDQEEIKDILIRGGFLE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataataaaaggattttggttacaggcggaaccggttcctgggggcatgaactc
atccggcagcttttgccgcagaacccgaaagagattgtcatattctcacgcagcgagtct
gctcaagtggccatgagccgcgaatatgaggattcccgcctcagcttcatcatcggcgat
atccgtgacaaggacgctttggtggcggcttgccggggcatcgattatgtctttcatctg
gcggccctcaagcatgttcccgtctgcgaagaccagccgtatgaagcgctcaagaccaac
gtggtcggaacccagaacgtcattgaggcagccattgccagcaatgtggaaaaagcgatt
tacatctctaccgacaaagctgccaatccctctaatttctatggaatgaccaaagcgatc
ggagaaaagctgttcgtctacgccaacctgctgggctcgcaaacccggttcgtgacagtg
cgcggcggcaatgtgctgggaactaacggcagtgtggttcatctgttcatgaagcagatt
aaggacaagggacaggtgcggattacggatatgaaaatgacccgcttcttcttcaccctg
cgcgatgccatcaccctgctgttcaaagcctccgaagtcagtctcggtggtgaaatcttt
gtaatgaccatgccaacctgccggatcgtggatctcgctgaagtactgattgaagcttcc
ggcagacgggatgtgagcatgattgaagcgggtatccgccctggcgaaaaaattcatgag
attctgatgagtgatttcgaaagccagacgacggttgtctacgatgagcagtatctggtc
attctgcccacattggatatgcctgaactcaaagcccattacagcagatatccgcatgtt
tccttcaacagcttcagctccgagaacaacctgatggaccaggaggagatcaaggacatc
ctgatccggggagggttcctagagtga
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