Paenibacillus graminis: PGRAT_29190
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Entry
PGRAT_29190 CDS
T03325
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PGRAT_29190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgm03021
]
PGRAT_29190
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_29190
Enzymes [BR:
pgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PGRAT_29190
Transcription machinery [BR:
pgm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PGRAT_29190
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PGRAT_29190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
PASTA
HHH_5
OPA3
Motif
Other DBs
NCBI-ProteinID:
AIQ71198
UniProt:
A0A089MI54
LinkDB
All DBs
Position
complement(6423088..6424032)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEANDEGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVMEDVTEIILNLKALSLKIHSDEEKVFEIDAEGEGIVTAGDIRADSDVEI
LNPDLHIATLGPGARLHMRIFAGRGRGYVQADRNKRDDQPIGVIPVDSIYTPISRVNYGI
DNTRVGQVTNYDKLTMEIWTDGSIRPEEAVSLGAKILNEHLVLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaagattgagaccgtagaagccaatgatgaaggaacctat
gggaaattcgtagttgaaccgctggaacgtggatatggcacgactctggggaactcgctt
cgccggatcctgctttcctcccttccgggagccgcagtgacttcggtccaaattgacggc
gttctgcatgagttctcgaccgttcctggcgtaatggaagatgtgacggagatcattctg
aaccttaaagctctttctctgaagattcattcagacgaagagaaagtgttcgagattgat
gctgaaggtgaaggcatcgttaccgcaggtgatatccgtgcggacagcgatgttgagatc
ctgaacccggatcttcatattgcaacgctgggacctggcgcgagacttcacatgcgaatt
tttgcaggccgcggccgcggttacgtccaagcggaccgtaacaagcgcgacgatcagccc
atcggcgttattccggtggattccatctatacgcctatctcccgtgtgaattacggcatc
gacaacactcgtgtcggtcaagtgaccaactacgacaagctgacgatggaaatttggacg
gatggcagtattagaccggaagaggctgtaagcctgggagccaaaattttgaacgagcac
ctcgttttattcgtaggtcttacggatgaagcgaaagacgccgaaattatggttgaaaaa
gaagaagacaaaaaagaaaaagtgcttgagatgacaatcgaagagcttgatctttctgtt
cgttcttacaactgcctcaaacgtgccggtattaataccgtacaagagctgactacgaaa
actgaagaagatatgatgaaggtccgcaacctgggccgcaaatctttggaagaagttcaa
gagaagcttgaggaactgggactgggactccgtacagaagaatag
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