Paenibacillus graminis: PGRAT_29580
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Entry
PGRAT_29580 CDS
T03325
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm03420
Nucleotide excision repair
pgm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGRAT_29580
03430 Mismatch repair
PGRAT_29580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_29580
Enzymes [BR:
pgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGRAT_29580
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGRAT_29580
MMR (mismatch excision repair)
Other MMR factors
PGRAT_29580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIQ71270
UniProt:
A0A089MFW9
LinkDB
All DBs
Position
complement(6492640..6494991)
Genome browser
AA seq
783 aa
AA seq
DB search
MQLVNIQDAVSRLNPPQRQAVETTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAI
LAITFTNKAAREMQDRVSKLVGPEGRDIWVSTFHSMSVRILRKDIDRIGFTSNFSILDST
DQLSVIRNCMKDLNIDTKKFEPKAVQAMISAAKNELITPAQYEQKIGDYLEGLVAKVYKM
YQKRLKSNNSLDFDDLIMKTIELFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRML
ADSHHRICVVGDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTSNILNAANGV
IALNTGRKPKKLWTDSAEGAKIKVFRGDSEHDEGYFVTGEISKNVKQGQSYQNHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKR
GLGDTTVGKLAAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSV
TELTEKILELSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLAL
IADIDSVNDEEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDELEEERR
LAYVGITRAEKQLFLSCARMRTLFGRTTANPPSRFLEEIPEELKEDTGGASDRFRRGAEV
GGAYGGRGFGSGSRGNFGSRSGAAGNAPAGGGNAGFGGSMASAAGGTSRVTVTTGGAQRA
PGAGAAEPGGFKAGDKVSHGKWGTGTIVSVKGSGNDTELQIAFPAPVGVKRLLAGFAPIT
KVE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgttaacatacaggatgccgtaagccggcttaatcctccacagcgtcaggct
gtagaaactactgaaggccctttgcttattatggccggagcaggcagcggtaagacacgc
gtgcttacccaccgcattgcctggctgattgcgaaccgcaaagcgccgccgtgggccatt
ctggcgattaccttcaccaacaaggctgcgcgggaaatgcaggaccgtgtgtccaagctg
gtagggccggaggggcgggatatttgggtatccaccttccactcaatgagtgtgcggatt
ttgcgcaaagatatcgatcggattggcttcacctccaacttttccattctggattctacg
gatcaattgtctgtcatccgcaactgcatgaaggatctgaatatcgatacgaagaagttt
gagcctaaggctgtccaggccatgatcagcgccgccaagaatgaactgattacaccggcg
caatatgagcagaaaatcggcgattatctggaaggcctggtggccaaagtgtataagatg
taccagaagcggctcaaaagcaataactcgctggattttgacgacctgattatgaagacg
attgaattgttcaaggaagtcccggaggtgctggatttctaccagaagaaattcaaatac
atccatgtcgatgagtatcaggatacgaacagggcgcagtatatgctctgccggatgctg
gcggacagccatcaccgcatttgtgtggtcggcgacagcgaccagtcgatctaccggtgg
cgcggggcggatatcacgaacattctgaacttcgaagaggattatcccgaagcgaagacg
attctgctggagcagaactaccgctcaacctcgaatattctgaacgcggccaacggcgtc
attgcgctgaataccggacgcaagcccaagaagctgtggaccgattcagcggaaggcgcg
aagatcaaggtattccgcggcgattctgagcatgacgagggttattttgtaactggagaa
atcagtaaaaatgtgaagcaggggcagtcgtaccagaaccatgccattctgtaccgtacc
aatgcccagtcgcgtgtaatagaagaaatcctgatcaaatcggatattccttaccagatt
gtcggcgggatcaagttctatgaccgcaaagaaattaaggatctgctggcgtatctgcgt
cttctgtctaatcccgatgacgatatcagcctgacgcggattatcaatgtacccaagcgg
gggctgggggatacgacggtgggcaagctggctgcagccgctgcttcacagggcgtgtct
atcttccgggcactgcagacggtggacgatctaggttttgcgggacggacgcgcaatacg
ctcgtagagttctacgatatgatcgaggcgctgcaccggatggtggaattcctgtccgta
acggagctgacggagaagattctggagttgtcccaataccggctggagctgcaaaatgag
aataccctggaatcccgctcccgtctggaaaatatcgacgaattcctgtcggtaaccatg
gaatttgaaaagaacaatgaggataagtcgctggtatccttcctgactgatctggcgctg
atcgcagacatcgacagcgtgaatgatgaagaggagcgcagcgatgctgtggtgctgatg
accatgcacagcgccaaggggctggagtttccgaccgtcttcattatcgggatggaggag
ggcgtcttcccgcacagccgggccttccaggacaatgatgagctggaggaagaacggcgg
ctggcgtacgtaggaattacccgtgcggagaagcagctgttcctcagctgtgcacggatg
cgcacactgttcgggcggacgacggcgaatccgccgtcgcgcttcctggaggagattccg
gaggagctgaaggaagataccggcggggcatcggaccgcttccgccgcggcgcggaggta
ggcggtgcctatggcggcaggggctttggcagcggcagccgggggaacttcggcagccgc
agcggcgctgccgggaacgcgccggcaggcggcgggaacgccggcttcggcggcagcatg
gcgtccgcagcgggcggtacgagccgcgtgaccgtgaccaccggaggcgcgcagcgcgct
ccgggcgcaggggcagcggagccgggcggcttcaaggccggcgacaaggtctcccacggc
aaatggggcaccggcaccattgtgtccgtgaagggcagcggcaacgatacggagctgcag
attgcttttccggcgccggtgggagtgaaacggctgctggcgggctttgcgcccattacc
aaagtcgaataa
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integrated database retrieval system
