KEGG   Pseudobacter ginsenosidimutans: FSB84_11190
Entry
FSB84_11190       CDS       T06126                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo  Pseudobacter ginsenosidimutans
Pathway
pgo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pgo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FSB84_11190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgo03021]
    FSB84_11190
Transcription machinery [BR:pgo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FSB84_11190
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 GerE Sigma70_r2 HTH_24 Sigma70_ECF HTH_11 HTH_10 HTH_23 HTH_Tnp_ISL3 HTH_AsnC-type HTH_5 HTH_40 HTH_29 Xre-like-HTH HTH_28 HTH_20 UPF0122 HTH_38 HTH_DeoR HTH_17 DUF603 Sigma70_r3 HTH_7 TnsD Phage_terminase
Other DBs
NCBI-ProteinID: QEC42228
LinkDB
Position
2743555..2744130
AA seq 191 aa
MTAYSTYKDDELVALLQQDDQQAFNTIYDRYWNLLFAQAFRKLDNAQEAEDLVQQLFIEV
WERRSRINITRSLNHWLAAAVKLKVMTVYSARFRNLQTTGEINEEYPADTPLPYSIIELQ
QMMAKLEVLVEALPERPRMVFRMSREGQLSNKEIADQLNISEKTVENHMNRALGSLRKSM
GDSPISVILLF
NT seq 576 nt   +upstreamnt  +downstreamnt
atgactgcatacagtacatacaaggacgatgagttggtggcattacttcaacaggatgac
cagcaggcattcaatacaatctacgatcgttactggaatctcctctttgcccaggctttc
agaaaactggataatgcacaggaagcagaagatctggtgcagcaacttttcatcgaagtg
tgggagcggagatcgcggatcaatatcacgcgttcgctgaatcactggctggctgcggct
gtgaagttaaaagtgatgactgtttattcagcccgtttccgaaacctgcaaacaaccgga
gagatcaatgaggaatacccggcagatacacctttaccgtattccatcattgaactgcag
caaatgatggcgaagctggaagtgctggtagaagcgcttcctgagagaccacgaatggta
ttcagaatgagcagggaaggccagctctccaacaaagaaattgcagatcaactcaatatc
tccgaaaaaacagtggagaaccatatgaaccgggcactgggctccctccgcaaatccatg
ggcgattcacccatttctgttatcctccttttctaa

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