Pseudobacter ginsenosidimutans: FSB84_11190
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Entry
FSB84_11190 CDS
T06126
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_11190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_11190
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_11190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_r2
HTH_24
Sigma70_ECF
HTH_11
HTH_10
HTH_23
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_5
HTH_40
HTH_29
Xre-like-HTH
HTH_28
HTH_20
UPF0122
HTH_38
HTH_DeoR
HTH_17
DUF603
Sigma70_r3
HTH_7
TnsD
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QEC42228
LinkDB
All DBs
Position
2743555..2744130
Genome browser
AA seq
191 aa
AA seq
DB search
MTAYSTYKDDELVALLQQDDQQAFNTIYDRYWNLLFAQAFRKLDNAQEAEDLVQQLFIEV
WERRSRINITRSLNHWLAAAVKLKVMTVYSARFRNLQTTGEINEEYPADTPLPYSIIELQ
QMMAKLEVLVEALPERPRMVFRMSREGQLSNKEIADQLNISEKTVENHMNRALGSLRKSM
GDSPISVILLF
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatacagtacatacaaggacgatgagttggtggcattacttcaacaggatgac
cagcaggcattcaatacaatctacgatcgttactggaatctcctctttgcccaggctttc
agaaaactggataatgcacaggaagcagaagatctggtgcagcaacttttcatcgaagtg
tgggagcggagatcgcggatcaatatcacgcgttcgctgaatcactggctggctgcggct
gtgaagttaaaagtgatgactgtttattcagcccgtttccgaaacctgcaaacaaccgga
gagatcaatgaggaatacccggcagatacacctttaccgtattccatcattgaactgcag
caaatgatggcgaagctggaagtgctggtagaagcgcttcctgagagaccacgaatggta
ttcagaatgagcagggaaggccagctctccaacaaagaaattgcagatcaactcaatatc
tccgaaaaaacagtggagaaccatatgaaccgggcactgggctccctccgcaaatccatg
ggcgattcacccatttctgttatcctccttttctaa
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