KEGG   Pseudobacter ginsenosidimutans: FSB84_18830
Entry
FSB84_18830       CDS       T06126                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo  Pseudobacter ginsenosidimutans
Pathway
pgo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pgo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FSB84_18830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgo03021]
    FSB84_18830
Transcription machinery [BR:pgo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FSB84_18830
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 GerE HTH_Tnp_ISL3 HTH_38 HTH_40 Xre-like-HTH HTH_24 HTH_DeoR HTH_17 HTH_3 HTH_28 HTH_10 DUF134 TnsD
Other DBs
NCBI-ProteinID: QEC43637
LinkDB
Position
4780548..4781090
AA seq 180 aa
MQLLLNSIQHQNDQKAFKQLYQLFFFKLYQFAYSYTRSKESSEELVNDVFLNIWQKRDTL
DSIQNINLYLYVSVKNASLNYLRRNSLPVPVSVDDLHADHFQITADPESALISRELQGQV
AAAIEQLPSRCKLIFKLVKQDGLSYKEVADLLGISTKTVDSQLCLALKKLAHLLHPVNSW
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaattacttctaaacagcattcaacaccaaaacgatcagaaggctttcaagcaactg
taccaattgttcttttttaaattgtaccagttcgcttactcttatacccggtccaaggaa
agctctgaagaactggtgaacgatgtatttctcaatatctggcagaagagagatacactc
gattccatccagaatatcaatctgtatctgtacgtctccgtaaagaacgcttcactgaat
tacctgcgcaggaatagtctgccggttccggtttctgtggatgatctgcatgccgatcac
tttcagatcactgccgatcctgagtctgcccttatcagccgcgaattgcagggccaggtt
gcagcagccatcgagcaattaccgtcacgttgtaaactgatcttcaaactggtaaagcag
gatgggctgagttacaaggaagtggctgatctattgggtatttccacaaaaacggtggac
agccagctttgtcttgctctcaaaaaactcgcgcacctactgcatcctgtcaatagctgg
tga

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