Pseudobacter ginsenosidimutans: FSB84_18830
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Entry
FSB84_18830 CDS
T06126
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgo
Pseudobacter ginsenosidimutans
Pathway
pgo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FSB84_18830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgo03021
]
FSB84_18830
Transcription machinery [BR:
pgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FSB84_18830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_Tnp_ISL3
HTH_38
HTH_40
Xre-like-HTH
HTH_24
HTH_DeoR
HTH_17
HTH_3
HTH_28
HTH_10
DUF134
TnsD
Motif
Other DBs
NCBI-ProteinID:
QEC43637
LinkDB
All DBs
Position
4780548..4781090
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AA seq
180 aa
AA seq
DB search
MQLLLNSIQHQNDQKAFKQLYQLFFFKLYQFAYSYTRSKESSEELVNDVFLNIWQKRDTL
DSIQNINLYLYVSVKNASLNYLRRNSLPVPVSVDDLHADHFQITADPESALISRELQGQV
AAAIEQLPSRCKLIFKLVKQDGLSYKEVADLLGISTKTVDSQLCLALKKLAHLLHPVNSW
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacttctaaacagcattcaacaccaaaacgatcagaaggctttcaagcaactg
taccaattgttcttttttaaattgtaccagttcgcttactcttatacccggtccaaggaa
agctctgaagaactggtgaacgatgtatttctcaatatctggcagaagagagatacactc
gattccatccagaatatcaatctgtatctgtacgtctccgtaaagaacgcttcactgaat
tacctgcgcaggaatagtctgccggttccggtttctgtggatgatctgcatgccgatcac
tttcagatcactgccgatcctgagtctgcccttatcagccgcgaattgcagggccaggtt
gcagcagccatcgagcaattaccgtcacgttgtaaactgatcttcaaactggtaaagcag
gatgggctgagttacaaggaagtggctgatctattgggtatttccacaaaaacggtggac
agccagctttgtcttgctctcaaaaaactcgcgcacctactgcatcctgtcaatagctgg
tga
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integrated database retrieval system