Paraburkholderia graminis: CUJ91_08105
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Entry
CUJ91_08105 CDS
T05548
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pgp
Paraburkholderia graminis
Pathway
pgp03030
DNA replication
pgp03430
Mismatch repair
pgp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUJ91_08105
03430 Mismatch repair
CUJ91_08105
03440 Homologous recombination
CUJ91_08105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgp03032
]
CUJ91_08105
03400 DNA repair and recombination proteins [BR:
pgp03400
]
CUJ91_08105
Enzymes [BR:
pgp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUJ91_08105
DNA replication proteins [BR:
pgp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUJ91_08105
DNA repair and recombination proteins [BR:
pgp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUJ91_08105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
Mg_chelatase
AAA_assoc_2
DUF3646
TsaE
AAA_2
AAA_24
HTH_20
Glyco_tranf_2_5
PIF1
Motif
Other DBs
NCBI-ProteinID:
AXF07894
LinkDB
All DBs
Position
PHS1_A:1811175..1814234
Genome browser
AA seq
1019 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFSK
ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLEHILGEEKVPYEAQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALAQGDGATVLTIADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAGDLRRFAETLSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFEP
APTGGGGGVAGSGAQAGQAGAGGSKRAGAPAVAAQPRALASPGSVASMGGAGRAGVGGVA
AAASPVGESRDVAAKVSSEPAALAEPVRRADSMEPAGRDAQSAAGQDGGNAAERAAHDVA
RTAAAASESAVEAASSSVVESAELERSAASAPASAPSSATPAAAQAAAAPPLAPWEDAPA
EPVADRRAAADASDASASASAGTASSDAAQASAARPSDAAQVSAAGSSETASATGSSEVG
QASATASSDAGQASSAPTPLNTAQPSAPDTATTTASDSASTDTKLAEDAPPAALNPPAAA
AFARASEAVDQAAGHNAAAAESEMPPRRAGGASAALDVLRSAGLKVSSDRGRASAATAAK
TAAPATPKPAAPRVVVPVPTPGAPRGAAAQQPPASTVRASAQSAQSTQPPQPAQPARSAQ
SAQSAQSAQSAQSAQSAQSAQSATRNDAQQNGSPVPPWDDMPPDDYMPLSASDDGYYGPP
DDNYMPVFDSGPDDVRVNASAPSAPAPAVDRRPLPPAVPLDPLGFNGDWPALAVDLPLKG
ISYQLAFNSELMALEGNTLKLNVPVPQYAETSQVAKLKAALADKLGQHVDVVVEVGPARR
TAAAHDAAMRAQRQQEAEREISADPFVQSLIREFDASIVPGSIRPITPDAGQNGASQVH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaaatggcggccgaaggatttcgcgtcgctcgtcgga
caggagcacgtggtgcgcgcgctcacgcacgcgctcgacggcggccgtctgcatcacgcc
tatctgtttaccggcacgcggggcgtcggcaagacgacgttgtcgcgcattttttcgaag
gcgctcaattgcgaaacgggcgtgacgtccacgccgtgcggcgtgtgccgggcgtgccgc
gagatcgatgaagggcgctttgtcgattacgtcgagatggacgcggcgagtaatcgcggc
gtcgacgaaatggcggcgctgctcgagcgcgcggtgtacgcgccggtcgacgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaatcacgccttcaacgcaatgttg
aagacgctcgaagaaccgccgccgcacgtcaagttcattctcgccaccaccgatccgcag
aagattccggtcacggtgctgtcgcgctgtctgcagttcaatctgaagcagatgccggcc
ggccatatcgtctcgcacctcgaacacattctcggcgaagagaaagtgccttacgaggcg
caggcgttgcgtctgctcgcgcgtgccgccgacggttcgatgcgcgacgcgctgtcgctg
acggatcaggcgatcgcctactcggcgaatcaggtcaatgaagaagccgtgcgcggcatg
ctcggcgcgctcgatcagagctacctgattcgcctgctcgatgcgctcgcgcagggcgac
ggcgcaacggtgctcacgattgccgacgaaatggcgctgcgcagtctgtcgttttccacg
gcgctgcaggatctcgcgagcttgctgcatcggattgcgtgggcgcagttcgcgccgtcg
tcggtactggatgaatggcccgaagccggcgatttgcggcgtttcgccgagacgctcagc
gccgagcaggtgcagttgttctatcagatcgcgacgatcggacgaagcgagctcggcctc
gcgcccgacgaatacgcgggcttcacgatgacgctgctgcgcatgctggctttcgagccg
gcgccgacgggcggcggtggcggcgtcgcggggtctggtgcgcaagccgggcaggcgggc
gcgggtggatcgaagcgggcgggcgcgccggcggtggccgcgcagccacgcgcgttggct
tcgcctgggagtgttgcgtcgatgggcggggcgggcagggcgggggtgggcggcgttgct
gcggctgcgtcgccggttggtgagtcgcgagatgtggcagctaaggtgtcttccgaaccc
gctgcgttagccgagccggttcgtcgagccgattcgatggagcccgctgggcgggatgcg
cagtccgcagcggggcaggatggcgggaatgcggcggagcgtgcggcgcacgatgtagcg
cgtacagcggctgcggcgtctgagtcagcggtcgaggccgcctcttcgtcagtggtagag
agcgcagaattggagcgatcggcggcaagtgctccggcgtccgcgccgtccagcgcaacg
cctgccgcagcgcaggccgctgccgcgccgccgttggcgccgtgggaggacgcgccggct
gagcccgtagctgatagacgcgccgccgcagacgcatcggatgcctctgcttctgcatcc
gctggcactgcgtcttccgatgcggcgcaggcatccgccgcgcggccttccgacgcggcg
caggtatccgccgccggatcatcggaaacggcatccgccaccggatcttcggaagtgggg
caggcatccgccaccgcatcttctgatgccggacaggcgtcttctgcgccgacacctttg
aatacggcgcagccgtccgcacccgacacagcaactaccactgcatccgactccgcctcc
accgacacaaagctcgccgaggatgcgcctcccgccgcattgaacccgcccgccgccgcc
gcgttcgcacgcgcgagcgaagcggtcgatcaagccgcaggccacaacgccgccgcagcc
gaatctgaaatgccgccgcgtcgcgcgggcggtgcgagcgcagcgctcgacgttctgcgc
agcgccgggttgaaggtatcgtccgatcgtggccgcgcgagtgccgccacggccgcgaaa
accgcggcgccggcaacaccgaagccagccgcgccacgcgtggtagtccccgtgcccacg
cccggcgcgccgcgcggcgctgctgcgcagcagccgcccgcgtcgaccgtgcgcgcgtca
gcgcaatcggctcagtcgacgcagccaccgcaaccagcgcaaccagcacgatcagcacaa
tcagcgcaatcagcgcaatcagcgcaatcagcgcaatcagcgcaatcagcgcaatcagcg
caatcagcgacccgcaacgacgcgcagcaaaacggctcgccggttccgccgtgggacgac
atgccgcccgacgactacatgccgctttccgcatcggacgacggctactacggcccgccc
gacgacaactacatgcctgtgttcgacagcggtccggacgacgtccgcgtgaacgcgtcg
gcaccgtccgcaccggcaccggccgtcgatcggcgtccgctgccgcccgccgtgccgctc
gacccgctgggcttcaacggcgactggccggcgctcgccgtcgatctgccgctcaagggc
atttcgtatcagcttgcgttcaacagcgaactgatggcgctcgaaggcaacacgctcaaa
ctcaacgtgcccgtgccgcagtacgcggaaacctcgcaggtcgcgaagctcaaggcggcg
ctcgccgacaagctcggccagcatgtcgacgtggtggtcgaagtcggcccggcccgccgc
actgcagccgctcacgacgccgcaatgcgcgcgcaacgtcagcaggaagccgagcgcgag
atcagcgccgatccgttcgtgcagtcgctgatccgcgaattcgacgcgagcatcgtgccg
ggctcgatccgcccgattactcccgacgccggccagaacggcgcgtcccaggttcactga
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