Puccinia graminis: PGTG_07648
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Entry
PGTG_07648 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
pgr
Puccinia graminis
Pathway
pgr03013
Nucleocytoplasmic transport
pgr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGTG_07648
09122 Translation
03013 Nucleocytoplasmic transport
PGTG_07648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgr03019
]
PGTG_07648
03041 Spliceosome [BR:
pgr03041
]
PGTG_07648
Messenger RNA biogenesis [BR:
pgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PGTG_07648
Spliceosome [BR:
pgr03041
]
Complex C
Other components
EJC/TREX
PGTG_07648
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PGTG_07648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Erf4
INTS5_N
Motif
Other DBs
NCBI-GeneID:
10529624
NCBI-ProteinID:
XP_003326670
UniProt:
E3KCW5
LinkDB
All DBs
AA seq
962 aa
AA seq
DB search
MTNQPTTKMVKNIYSDYQTQLTNQLTNYIDRLDKQQRTTTTPTTRQNIIQEITEQLPALP
EQATELRRLIISSVFSSLISHLNQNRKEGEQDYTLYHLLDLVLAFIDHGLAAPELALGCI
EEILEASTVQQAQFIFGYLESRVQRLTVDMLPDRGKGLIFLRMQNNLLRRLSKSLHTVFC
GRILCFLSSVFPIAEKSGVNLRGAFNHGNITKFDQFDSPPSTMLISNNNSTTDEIEAGSK
EIEKITPQDSTPRPNEEIKPDDSARVKASKSATDKREFYTRFWSLQALLSNPPELFKSWT
PDPTVPPALPSSSTTTTTTATTSATSATSATLDPNSSQPSTPNLKKLKDGISKTLEVFGR
MTKKELELGTSHLHKSEDMDGLEQFFFPKFLTKSNLLDLEIADPYFRRQVLTQFLIILQY
IRGFSPEERAKRASLPKSNRISEIPYVYQAKDEAWVLKLSGEVWKTLYATPPHGEIFAMT
IQQILIRESSWIMWKAGSCASFEKASLDDLDPAPGYKRITSNPVKFPHPVGTPALSKLWE
NKVTLDSIENIDPTAGVPDLKTLHLKIQHLDLQLKQLQENLPPDTDPKAETIKSQVQQLQ
ERKTGLSWRALRIAQSSHLQFFGKIGMPADINKLMMVIEESKNRGSVPLSRPVSGMNASP
LTTPNLQSMSGSATTGVEEESMGKACTGETTQELQRVPSNEASQPDVVMLDGESIMESVG
GPGGLASELDGELISESLPSVAPPVPSGSTDEVRSATSPVSRPASPQPIPSAVAPTVSTI
IPPTLSRHHSHPQQQPVSSSSSSQIRTSPTQTLHHEPHRMSDVEQVIRRMEAQANRSAVG
TPTPPPPQSSSGTSGGRHGPGSGGSGGGGGSGDYSRPHHPHTGLLYYHPSLPSHPHHNNH
GPRLGPPPGRPNSNNNSNNNSNLNNLNTLREHPGILKRPVAEVIDLEAPDLAIGNDPKKH
KN
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccaaccaacaacgaagatggtcaagaacatctactcagactaccaaacccag
ctcacaaaccaactaaccaactacatcgaccgactagacaaacaacaacgaacaaccacc
acaccaaccacaagacaaaacatcatacaagaaataacagagcagctgccagcactgcca
gaacaagcaaccgaactcagacgattgatcatctcatcagtcttctcatcactcatcagt
catctcaatcagaacagaaaagaaggagaacaagactacacgctctaccatctactcgat
ctcgtactagccttcatcgatcatggtctcgctgcacccgaactggcactgggctgtatt
gaagagatactcgaggcttcgaccgtccaacaggcccaattcatctttggatatctcgag
tcaagagtccaaagattgactgtcgatatgttgcccgacagagggaaagggctaatcttc
ctaaggatgcaaaacaacctcctcagaagactctcgaaatcattgcataccgtgttctgt
gggaggatcttatgcttcttatcctcagtcttcccgatcgccgagaagagtggtgtcaac
ctacgaggagcattcaatcatgggaacatcaccaagttcgaccaattcgactcacccccc
tcgaccatgctcatctccaataataatagtactaccgatgaaatcgaagcgggcagtaaa
gagatcgagaaaattactccccaagattcgaccccgagaccaaacgaagagatcaaacca
gatgattcggctcgagtcaaggcatccaagtcagctaccgacaagcgtgaattttatacg
cgattctggtccctacaagctctcctttcgaacccgccagagctattcaagtcctggacg
cctgacccgaccgtcccaccagcactcccctcatcatcaacaacaacgacaacaacagcg
acgacttcagcgacttcagcgacttcagcgacacttgatcccaactcatcccaaccctcg
actccgaacctcaaaaaactcaaggacgggatctcgaagacgttggaagtctttgggagg
atgaccaagaaagaactcgaactcggcaccagccatctccataaatctgaagacatggac
ggactcgaacagttcttctttcccaagttcttgaccaagagtaacttgttggacctcgag
attgcagacccttacttccgacgtcaagtcttgactcaattcttaatcatcttgcaatat
atacgtggcttctctcctgaagaacgagccaaacgcgcctccttaccgaaatcaaaccgg
atcagtgaaatcccttacgtctatcaagccaaagatgaggcttgggtactcaagttgagt
ggagaggtctggaaaacgctttatgctactccacctcatggggaaatcttcgcaatgacg
atccaacaaattctgattcgagaatctagttggatcatgtggaaagctggctcgtgtgcc
agttttgagaaagctagcttagacgacctcgatccggcgcctggatacaaacgcatcacc
agtaacccggtcaagtttcctcatccagtggggacacctgctctcagtaaactttgggaa
aacaaagtcacgttggactcgatcgaaaatatcgatcctaccgccggggtccctgatctg
aaaactctgcatctgaaaattcagcatcttgatcttcagttgaaacagcttcaggagaat
ctgcctcccgataccgatcctaaagctgaaaccataaaatcacaagttcaacagctccaa
gaacgaaaaacaggattatcatggagagcattacggatagcccagagttcccacttacaa
ttttttgggaagatagggatgccagcggatatcaacaagttaatgatggtgattgaggaa
tcgaagaaccgagggagtgtaccactgagtcggccggtgtcggggatgaacgcgtcgccg
ctgacgacgccgaacctccaatcgatgagtggctcggcgacgaccggggtggaggaggag
tcgatggggaaggcgtgtacaggggagacgacgcaggagctgcagcgggtgccgtcgaac
gaggcgagccagccggacgtggtgatgcttgatggggagagcatcatggagagcgttggt
gggccgggggggttggctagcgagcttgatggcgagctgatcagcgagagcttgccctcg
gttgcaccgcccgtcccaagcggctccaccgacgaggtccggtcggccaccagcccggtc
tcccgccccgcctcgccccagccgatcccctccgccgttgcacccaccgtctccaccatc
attcctccgaccctcagccgtcaccactcccatccgcaacaacaacccgtctcctcctcc
tcctcatcccagatccgcacctcaccaacccagaccttgcatcacgagccacacaggatg
tcggacgtagaacaagtgatccgacggatggaggcccaagcaaatcggtccgcagtcggc
acacccacccctccgcctccgcagagctcttctggtacttcaggtggtcgacatggccct
ggctctggtggtagtggtggtggtggcggctctggagattactctcgccctcatcaccca
catacaggtctactctattaccacccttcgctaccttcccatcctcaccataacaaccat
ggccctcggctaggccctcctcccggtcgtcctaactcgaataataatagcaacaataac
tcgaatcttaacaatctcaatactctgagagagcatcccgggatccttaaacgtcctgtc
gccgaggtcatcgatctcgaagcccctgatctggcgatcggtaatgatcctaaaaaacat
aaaaattag
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integrated database retrieval system