Puccinia graminis: PGTG_11063
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Entry
PGTG_11063 CDS
T02226
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
pgr
Puccinia graminis
Brite
KEGG Orthology (KO) [BR:
pgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgr03009
]
PGTG_11063
Enzymes [BR:
pgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PGTG_11063
Ribosome biogenesis [BR:
pgr03009
]
Eukaryotic type
Pre-60S particles
Helicases
PGTG_11063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
BppL_N
Motif
Other DBs
NCBI-GeneID:
10544300
NCBI-ProteinID:
XP_003330153
UniProt:
E3KN98
LinkDB
All DBs
AA seq
1018 aa
AA seq
DB search
MDGQENYESSDGEQAIDLTETLANISKNQQQQHQALGLSDDDEDEFIRLSSKKANFKAGS
KVLRATTNNNKKKNPATLTGGGSFQSLGLHPSLLRAILLRGFNSPTPIQRAALPHILASP
PRDVVGMARTGSGKTLAYLIPLIQTLSGVHSVQFGIRALILVPTRELALQVLKVGKDLAK
GFIQGDRSKPSTSQDSETNHKAEGLRWGLIVGGDSLEDQFTMFSTNPDVIIATPGRLLHL
VVEMNLDLKSVAFVVFDEADRLFEMGFATQLEETLHRLPANRQTLLFSATLPKSLVEFAK
AGLQNPKLIRLDSESKISSDLQMAFLSVKPIEKEAALLVLISNIVGVPKADTTEQPNESF
NHQSQPNFSRGSGANLSKIRRKPTRELAAHQTIVFTATKHHVEYLGGLLVAAGYRVSLIY
GALDQTARREQLDSFRLGQTNILVVTDLAARGIDIPILENVINYDFPSSARAFVHRVGRT
ARAGRKGWAYSLITQSELPFLMDLQLFLSRPLLACPLPANEDPSQTDFSSSLVIGTIPRE
LLDAETEYVRETLVSPNSALIALATVVKRAQKMYEKSQSTASNESHRRAKEFVLNGKGFS
GAKNEEASIHLIFKDRKQELPSTQRGVKRTKKDDQTVKLRDQLLAKVNQFTPNETVFEIG
TRGKGVAAQLMRDRRKSMGKKIAGSKEAAKLREDQLRAEQIIDPSPSLAKQTCPSGPSDK
QVALVAATEGELEETFEMPRKKPKVKEGFRDPEAYLTYEQSGAAEEKGYNLNEGTSAEFV
TQSKVALFDLGTNDEGKLACLSNAQKASQVKWDRKTKKFVKVGQVGQDNVKLVKTESGVK
LPASFKTGSFDNWKKAQKIRIPNVGEQELQNTHPFNHLHRKFRHTSGAPSGPHDHQDRST
HSTGGRRDGRMEQNKRGKKVFTKTIDGQKKFLGPSHVVTRGPSSTSKSNFSGHARHNQHH
KNSSNHHVSSSFSNKKGSASSSSRNNNAGLKSVDQIRKSRELKERRKIRSNQPSRRKK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggacggacaggagaactacgagtcatcggatggcgaacaggcaatcgacctaaccgaa
acactcgcaaacatcagcaagaaccaacagcagcagcatcaagcactcggactatctgac
gacgacgaggatgagttcatcaggctatcatcaaagaaggccaacttcaaagcaggctca
aaagtactaagagccacaaccaacaacaacaagaagaagaacccagccaccctcaccggc
gggggatccttccaatcactcggcctacatccatcactactcagagccatcctcttgcgc
ggcttcaacagccccacacccatccaacgcgccgccctaccacacatcctcgccagtcca
ccacgagatgtagtcggaatggcaaggaccggatctgggaaaacactggcctacctcatc
ccactcattcaaaccttgtcaggtgtccattcagtccagttcggtatcagagcactcatc
ctcgtacccacccgtgaactggccctacaggtcttgaaggtcggaaaagatctcgccaaa
ggattcatccaaggcgatcgctctaagccttccacatctcaagactcagaaacgaatcac
aaggctgaaggcctcaggtggggtctgatcgtcgggggtgactcactcgaagatcagttc
acaatgttctctactaacccggatgtaatcatcgcaactccagggcgtctacttcatctg
gtagtcgaaatgaacctcgacctaaaatcagtggcatttgttgtcttcgatgaagccgac
cgattattcgagatgggtttcgcgactcaacttgaagaaaccttacatcgactgccagcc
aacagacaaaccttactattctcagccaccttacccaagagtttggtcgaattcgctaag
gctggattacagaatccaaaattgatccgattggacagtgaatcaaagatcagctcggac
cttcagatggcattcttgagcgtcaagccgatcgaaaaggaggctgcactattggtcttg
atctctaacatcgtcggtgtacccaaggccgacacaacagaacaaccaaatgagtctttc
aaccaccaatctcaaccgaatttctcgcgtggatctggggcgaacctatcaaaaattcga
cgcaagccaactcgggagcttgcagcccatcaaacgatcgtcttcactgccaccaagcac
catgtcgagtatcttggtggacttttggttgcagctggctatcgggtctcattgatctat
ggagcactagaccagactgcccgtcgggaacaactggactccttccgattaggccagacc
aacatcctcgtcgtcaccgatctggcggcccgagggatcgatattccgatcctcgagaac
gtcatcaactacgatttcccgagttctgcccgtgcgttcgttcaccgagttggacgaact
gctcgggccggtaggaagggctgggcttactcactgatcacccaatcagaactacccttc
ctgatggacctgcaactcttcctgtcaaggcctctgctcgcctgtcccctaccagccaac
gaggatccgagtcagacggacttctcctcaagcttagtcatcggaacgattcctcgagag
ctgctcgacgccgagaccgaatacgtccgtgaaacactcgtctcccccaattcagccttg
atcgccctcgccaccgtggtcaagcgggctcagaagatgtatgagaagagccagagtacc
gcgagtaatgagagccatcgacgtgccaaagagtttgtgctgaacggcaaagggttcagt
ggggccaagaacgaagaagcctcgatccatctcatcttcaaggatcggaaacaagagctc
ccctcaacccaacgaggtgtcaagaggaccaagaaggatgatcagacggtcaaattgaga
gaccaattactggccaaagtgaaccagttcactcccaacgagaccgtctttgagatcggc
acccgtggcaaaggcgttgcggctcagctgatgagagaccgacggaaatcgatgggaaag
aagatcgctggctctaaggaggccgctaagctccgagaagaccaactccgtgctgaacag
atcatcgatccttccccatctctcgctaaacaaacttgcccgtctggtccatccgataag
caagtggcgcttgttgctgccaccgaaggcgaacttgaggaaacattcgagatgccgcga
aaaaagccaaaagtcaaggaaggtttccgagatcctgaggcctatctaacgtacgaacag
agtggggcagcggaagagaagggatacaacttgaacgaagggacgtcagcggagtttgtg
acccagagcaaagtagcgctatttgatttagggacgaacgacgagggaaagcttgcgtgt
ctgtcgaatgcacagaaggcgtcgcaagtgaagtgggatcggaagacgaagaagtttgtg
aaagtgggccaggtgggccaggataatgtgaagctggtcaagaccgagagcggggtcaag
ttgccggcctcattcaagacgggttccttcgacaactggaagaaggcccagaagatccgg
atccctaatgtgggcgaacaggagctccaaaacacccatccgttcaaccatctccatcgc
aagttccgtcacactagtggagcccccagtggtcctcatgatcaccaggaccgctcgact
cattcgactggtggtaggagagacggcaggatggaacagaataagaggggtaaaaaggtg
ttcactaagacgatcgatgggcagaagaaattccttggtccctctcatgtcgtcactcga
gggccctcctcgacttccaaatctaacttctccggtcatgctcgccataaccaacaccat
aaaaatagcagcaatcatcatgtgtcttcttctttcagcaacaagaaaggtagtgctagt
agtagtagtaggaataataatgctggcttgaaatcggtcgatcagattagaaagtctcgg
gaacttaaagaacgtagaaagattagatctaaccaaccttctcgtcgtaaaaaatag
DBGET
integrated database retrieval system
