Pyricularia grisea: PgNI_04661
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Entry
PgNI_04661 CDS
T09406
Name
(RefSeq) uncharacterized protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pgri
Pyricularia grisea
Pathway
pgri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PgNI_04661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgri03041
]
PgNI_04661
Enzymes [BR:
pgri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PgNI_04661
Spliceosome [BR:
pgri03041
]
Complex C
Other components
Step II factors
PgNI_04661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
ResIII
SLFN-g3_helicase
T2SSE
nSTAND3
ATPase
Flavi_DEAD
SRP54
AAA_30
Microtub_bd
Myosin_head
Motif
Other DBs
NCBI-GeneID:
41959614
NCBI-ProteinID:
XP_030984085
UniProt:
A0A6P8BA87
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MSDRDSNPKRRRLDFNPLRSDDRYSSLPTRESGRNFKEPPRRFQFNRDRRNGDGTGSGVT
TPRARDDASPQAEVPEEDETALDRDWYAGDETGHTFGDEYHNPFASYADDSLAEKEQIEK
KTGRFDRMSARAQQKQRDIDAWETNRMLTSGVAQRRDLGADFEDDEEATRIHLLVHDLKP
PFLDGRTVFTKQLEPVPAVRDNQSDMAVFSRKGSRVVKERRQQRERQKQAQDATNMAGTA
LGNLMGIKGEEDGDSALPVPDEQKPAEVKAEKSDNKFSEHMKKNDGASNFSQTKSLREQR
EFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQPRRVA
AMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKETIIKYMTDGVLLRESLNEPDLDRYSCI
IMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDFTIPGRTF
PVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRERLDALND
PPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLK
VYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRT
NLSNTILLIKSLGVKDLLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTDLGRKMNFF
PMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQEESDAAREKFFVPESDHL
TFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMKTQKMDIVSCGTDWDVV
RRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGLGFLPDYVVYHELILTSKEY
MSTVTSVDPMWLADLGGVFYSVKEKGYSARDKRVVETEFNRKMEIEAQMAEDKRRDEEQK
RADADKANGKGKSSGDGAGKKFVTKGSVRKPVMKKRGRP
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcgagacagtaacccgaaaaggcgacgcctcgactttaatccattgcgctct
gacgaccgctacagctccctcccgactagagaaagcggtcgaaacttcaaggaaccgccg
cgtcggtttcagttcaaccgtgacaggagaaatggcgatggtacaggctccggcgtcacg
acgcctcgtgcccgggatgacgcttcacctcaggcggaagtgcccgaagaggatgagacc
gcgctggaccgcgactggtacgcaggtgacgagactggacacacatttggcgacgagtac
cacaacccattcgcgtcgtatgccgatgacagcctggctgaaaaggaacagattgagaag
aagacgggtcgtttcgaccggatgagcgccagggcacaacagaagcagagggatattgat
gcttgggagacgaatcgtatgctcacttcaggagttgctcagaggcgggatctgggggcc
gactttgaggacgatgaagaggccacccgcatacatctcctcgtgcatgatttaaagcct
ccttttttggacggccgcaccgtcttcaccaagcaactggagcctgttcccgcagtcagg
gataatcagagcgacatggctgtgttcagtcggaagggtagcagggttgtaaaggaaagg
agacaacagagagagcgccagaagcaggcgcaggatgcaaccaacatggctggcaccgca
ctgggaaacttaatgggcatcaagggagaggaagatggcgacagtgcgcttccagtacca
gatgaacaaaaacctgctgaagtcaaggctgaaaaatcggataacaagttcagcgagcac
atgaagaaaaacgacggggccagcaatttcagtcaaaccaaatcactcagggaacagcgc
gaatttctacccgcttttgcggttcgagaagatctgatgcgggtgattcgggacaaccag
gtgatcatcgtagtcggcgagactggttctggcaagaccacacagctcactcagtttctg
tatgaggatggatacggtcaactcggcatgataggctgcacccagccaaggcgagttgct
gcaatgagtgtagccaagcgcgtaagcgaagaaatggaggtcaaacttggcgggacggtt
ggttatgcaatccgtttcgaggattgcacaagcaaagagactatcatcaagtatatgacc
gatggtgttctactgcgcgagtctctcaacgagccagacctggatcgatactcatgtatc
atcatggacgaggcacacgaacgtgcactcaacactgatgttttgatgggcttgttcaag
aaaatattgcaaaggaggcgagacttgaagctcatcgtaacatctgcaacgatgaacgca
aagcgcttttcagactttttcggtggcgcaccggatttcaccatccccggaaggacattc
cccgttgatgtcatgttttctcgatcgcccgtggaggattatgttgaccaggcggtccag
caagttctcaatatccatgtctccatgggaactggtgatattcttgtgttcatgacagga
caggaggatattgaggtgacttgcgagctggttcgagagcgtttggatgcgctaaacgac
cctccaaagctcagcatcctacctatatacagtcagatgccagctgatctacaggccaag
atctttgaccgagcaccgcctggtgtccgcaaatgcatcgttgccacgaatattgcagaa
acaagtttgacagttgacgggatcatgtacgtggtcgatgcgggttattcgaagctcaag
gtttacaaccccaaaatgggcatggatacccttcaaatcacaccgatttcccaagcaaac
gcctctcaaagatccggacgtgctggaagaacaggcccaggcaaagcttttcggctgttt
acggagaaggcattcaaagatgagctctatatacaaaccatacccgagattcagcgcaca
aatcttagcaacaccatcctgctcatcaaatcactcggtgtaaaagatttactggacttc
gacttcatggatccgccgcctcaggatacgatgacaacatcgctttttgacctttgggca
ctcggagctcttgataatcttggagacatgacagacctcggacgcaaaatgaacttcttt
ccgatggatcccccactggcaaagttaataatcatggcggaagagtacggctgtaccgag
gaaatgatcacaatcgtgtcgatgctttcagtgcccaacgtcttttaccggcccaaggag
cgacaagaggagtcggacgcggcgcgagaaaagttctttgtgccagagtcggaccacctc
acgttcttgcatgtatattcgcagtggaaggcaaacggacactccgatgcgtggtgtagt
cgccacttcctacattccaaatcgctcaggagagccaaggaggtgcgagatcaactcctc
gacatcatgaagacccaaaagatggacattgtgagctgcggaacagactgggacgtggtg
cgcaggtgcatctgctctggatactaccaccaggctgccaaggtgaagggtatcggcgag
tacatcaacttgcggactagcgtgacagtccagcttcacccgacgagtgcgctttacggt
ctcggattcctgcccgactacgtcgtctaccacgagctcatccttacctccaaggagtac
atgtcaactgtgacatcggtggatcccatgtggcttgctgacctaggtggcgttttttat
tcggtcaaggaaaagggatactctgcacgggacaagcgtgtggtggagaccgagttcaat
cgcaagatggagattgaggcacaaatggccgaggacaagcgtagggatgaggaacagaaa
agggcggatgcggacaaggcgaacggcaaaggcaagtcaagtggtgatggggccggcaag
aagtttgtcaccaagggttctgtaaggaagcctgttatgaagaagcgtgggcgtccatag
DBGET
integrated database retrieval system
