Pyricularia grisea: PgNI_05753
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Entry
PgNI_05753 CDS
T09406
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pgri
Pyricularia grisea
Pathway
pgri03022
Basal transcription factors
pgri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PgNI_05753
09124 Replication and repair
03420 Nucleotide excision repair
PgNI_05753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgri03021
]
PgNI_05753
03400 DNA repair and recombination proteins [BR:
pgri03400
]
PgNI_05753
Transcription machinery [BR:
pgri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PgNI_05753
DNA repair and recombination proteins [BR:
pgri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PgNI_05753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Tfb4
Motif
Other DBs
NCBI-GeneID:
41960693
NCBI-ProteinID:
XP_030982160
UniProt:
A0A6P8B4T7
LinkDB
All DBs
Position
I:2397723..2402042
Genome browser
AA seq
511 aa
AA seq
DB search
MADSDGEFVVDDGSDDELVGQSGGARGGRSGKGGDDGGKRRKKASKAAWEDLQRSWDVVH
ELDDGNLSLEGFLEAEKRRRVLRDTTPIQRGIIRHLVLVIDMSFAMAEKDLMPTRHRLTI
SYAIEFVREYFDQNPISQLAIVGMRDSIAVRISDLSGNPAEHIEKLRALPDLDPSGSPSL
QNALEMCRGALFNTPSHGTREVVIIFGALLSLDPGDIHETIDGLIQDRIRVSVIGLAAQV
YICEEICRKTNSGKAAADLGIVTDIDGSAYNVALHEVHFRELLMSATRPPITRQSQLQQA
TGEAASLLMMGFPSRKTDKDPALCSCHNRPVRNGFLCTRCGSRVCRLPSECPACGLTLIL
STHLARSYHHLFPLRVWSEVPWTDAGRSISCFACHAPFPDAKSKEKGKDAEKEGAGDKHL
KVPSKDTNGKKKKSTAPMPKGVSESGRYMCQVCRNHFCIDCDVFSHEVLHNCPGCQSDTR
GDLTTTNGKGATNGAASNGVSQDSNGAMAID
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcagatggcgagtttgttgtcgacgacggctctgatgacgagcttgtagga
cagtcaggcggcgcacgcggggggcgatcgggcaagggcggggatgacggtggcaagcgc
aggaagaaagcaagcaaggcagcatgggaagacctacaaagatcatgggatgtggtccac
gagctggatgatggcaacctgtcgctcgagggctttctggaggccgagaagcgtcggcgt
gtgctccgtgacactacgcccatacaacgtggaatcatacggcacctggtcttggtcatc
gacatgtccttcgccatggcagagaaggacttgatgccgacgaggcatcgcttgaccatc
tcgtacgctatcgaattcgtgcgcgaatattttgaccaaaaccccatcagccagctcgcc
atcgtgggcatgagagatagcatagccgttcggatctcggatttgagcgggaatccggcc
gagcacattgagaaactcagggctttgccggatctagacccgtctggcagccctagtcta
cagaacgctctggagatgtgccgaggcgcattattcaacactccgtcacatggcacccgt
gaggtggttataatattcggcgcattattatcactggatcccggcgacatacacgagacg
attgatgggctcatacaggataggatacgagtgtcggtgattgggctggcggcccaggtc
tatatctgcgaggaaatatgccgaaaaacaaattctggcaaggcagcggcagatctggga
attgttacagacattgacggatccgcatacaacgtagccctccacgaggtgcactttcgg
gagctgctgatgtcggctacgagaccccccataacacgacaaagccaacttcagcaggca
acgggagaggccgcttccctcctgatgatgggatttccatcgcgaaagacggacaaggac
ccggctctttgttcatgtcacaaccggcctgtacgaaacggcttcctgtgcacacgatgt
ggatcaagagtttgtcgtctgccctcagagtgccccgcgtgcggcctcacgttgatcttg
tccacccacctggctcgatcgtatcatcacctcttcccgctaagagtatggtccgaagtg
ccatggaccgacgccggtcgcagcatctcctgctttgcgtgtcacgcaccgttcccagat
gccaaaagcaaggaaaaaggcaaggacgccgaaaaggagggtgccggtgacaaacacctc
aaggtcccctccaaggatacgaatggcaaaaagaagaagtctacggcacccatgcccaaa
ggcgtgagcgagagcgggagatacatgtgccaggtgtgcaggaatcacttttgtatcgac
tgcgacgtcttttcgcacgaggtgttgcacaactgccctggatgccagagcgacacccga
ggcgacctgactacaacgaacgggaaaggggccaccaacggagctgccagcaatggtgtt
tcccaggattccaacggggccatggcgattgactaa
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