Pedobacter ginsengisoli: CPT03_01730
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Entry
CPT03_01730 CDS
T05145
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_01730
Transporters [BR:
pgs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CPT03_01730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ATP55272
UniProt:
A0A2D1U0W8
LinkDB
All DBs
Position
439600..441090
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AA seq
496 aa
AA seq
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MILSRKNKSIRKIRDKWFLILFLIIALSGCKKWVEVPPPVTSLTGESVFKVDATAAAVLT
NLYARMGSYSSIGSYKSSVSYLLGLSADEFVLTSFGSELENDYYKNRLRANIVGGEFWGE
FYNYIFICNSAIEGIEKSNDLSKGVKEQLLGEAKFLRAFCYFYLVNIYDDVPKILTTDYK
ENSVLARSPVPEVYKQIISDLMKAREGLTDGYVKSDAETKYTIGSEERIRPNKWAAIALL
ARVCLYTKDYINAEILSTQIINQTALYNVKDVPLVNVFLKNSKESIWQVQPIQKSPGNTG
DAFLFVIPGSGFSENNPVYLSEDLLNKFEVLDERKFAWVNIFSTGNGNNCYYACKYKIAD
ITSNTKEYVTVLRLAEQYLIRAEARAYQDDLEGAREDLNVVRNRAGLENTLANDRKSILK
AIINERQLELFTEWGHRWLDIKRTAGFENSSVSLADEIMPAICTSKGGLWTPNAKLFPIV
LGDIQNNPNLIQNTGY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatattaagtagaaaaaataaatcaattagaaaaattagagacaaatggtttctaatt
ttgttcttaatcattgcattgtcaggatgtaagaagtgggtcgaagtcccgccgccagtg
acctctctaacaggagaaagcgtttttaaagttgatgcaactgctgctgcagttttaact
aatttatatgcaaggatgggctcatatagcagtattggatcctataagagtagtgttagt
tacttgctagggttatcagcagatgagtttgtgcttacttcttttggatcggagctagaa
aatgattattataaaaaccgcttgagggcgaacatagttggtggagagttctggggcgaa
ttttataattatatatttatctgtaattctgcaattgaaggaatagaaaaatcaaatgat
ctttccaaaggagtcaaagagcaattattaggtgaggctaagttccttagggccttttgt
tacttctatctcgttaatatttatgatgatgtgccaaagattttgactaccgattacaaa
gagaattctgttcttgcaagatcaccagtgccagaggtatacaaacagataatttccgat
ttgatgaaggctagagagggattgactgacggatatgttaaatcagatgcggaaacaaaa
tatactatcggttctgaagaaagaattcgtcctaacaaatgggcggctattgccttactt
gctcgtgtatgtttgtatactaaagattatatcaacgctgaaattctatctacacagatt
attaaccagacagcactgtacaatgtaaaagatgtgcccttagtaaatgtcttcctaaaa
aacagtaaagaaagtatttggcaagtacaaccgattcaaaaatcacctggaaatacggga
gatgcttttctatttgtaatacctggctccggttttagcgaaaataatccagtttatttg
agtgaagatctgttgaataaattcgaagtcctagatgagagaaaattcgcttgggtaaac
atattttcgacggggaatggtaacaattgttactacgcatgcaagtacaagattgcagat
attacctcgaataccaaggagtatgtaactgtattgcgattagcagaacagtatcttatt
cgggcagaagcacgtgcatatcaagatgacttggaaggagccagagaagacctaaatgtt
gtaagaaacagagctggtttagaaaataccttagcaaatgatcgcaaatctattctgaag
gcaataattaatgaaagacagttggaattattcactgaatggggccatagatggctagat
atcaaaaggacggctggctttgaaaattcatcagtaagtctggccgatgaaattatgcct
gcgatatgcacttcaaaaggtggcctttggactccgaatgcaaagctatttccaattgtg
ctaggtgatattcaaaacaatccaaatttgattcagaacaccggatattaa
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