Pedobacter ginsengisoli: CPT03_12195
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Entry
CPT03_12195 CDS
T05145
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pgs
Pedobacter ginsengisoli
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgs02000
]
CPT03_12195
Transporters [BR:
pgs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CPT03_12195
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
ATP57178
UniProt:
A0A2D1U6F7
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All DBs
Position
complement(2956263..2957822)
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AA seq
519 aa
AA seq
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MKRNLNHKNYNPVKSALAIGVAIILMLMGSCKKVVDVKSTRAVAEVNMWNKLEDTRAALL
GIYGLTRAAMVENNAHWIYGDVRGKQFVSPTRQDLKAVIDNRLTASYKTLDQLSNWRRWY
AVINAANIFLERVRDVKKADLRYTASNMEIDIAQARVLRAFAYFYMVRIWGNVPLIISSH
DGSFENRAQNSGAEVLAWAEKEILGVVNVLPNKYGENDPKQPGLYYGENHGRWTGSLVRR
ISAYAVLAHIAAWQGDYIKVASNATKVINEIGSAEITLTDVNSLTSSNGFFSSKRQGHLL
GFNSVYEHGEGGMSGHIEELTLAFPFVNKAIPDIYMSKDSILNTFNEKKDTRFGLDTLGR
PTTDRYFYNFDGRYPIFSKIKVIMAGSASTSTTDAKFSFFSSIALFTRLEDIYLLRAEAS
SVLGDRQGAINDLNTIRSSRGLPNYSEVTNGLVIDAIFKERKRELIGEGHYWFDQVRYNK
IRQNNSVFTELIKTGGIYWPVSEELLQQNKLLTQNQYWK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatttaaatcataagaactataatcctgttaaaagtgcgcttgcaataggt
gtggctatcattttaatgctgatgggcagctgcaagaaggtcgtagatgttaaatctacc
agagcagttgctgaggtcaatatgtggaataaactggaggatacccgggccgcattatta
ggcatttatggattaacacgtgccgcgatggtcgagaataatgcccactggatttatggc
gacgttagaggaaagcaattcgttagtcccaccagacaagacctcaaggcagttattgat
aatcgtcttactgcctcgtataaaacattagaccagctttccaactggcgcagatggtat
gcggtaattaatgcagccaatatcttcctggaaagggtgcgcgatgtaaaaaaggccgac
ttacgctacacggctagtaatatggaaattgatattgctcaggcgcgcgttctcagagct
tttgcctatttctatatggtgcgcatatggggaaatgtaccacttatcatttcatcacac
gatggcagtttcgaaaacagagcacaaaatagcggtgctgaggtattagcctgggcagag
aaagaaatactgggagtagtgaatgtattgccaaataaatatggcgaaaatgatcccaaa
caaccggggctttattatggtgaaaaccatggccgatggacaggctcattggttcgacgc
atctctgcttatgcagttttagcacatattgctgcctggcaaggcgattacatcaaggtg
gccagtaatgcaactaaagtaattaatgagattggtagtgccgaaattacccttactgat
gtgaacagcttaaccagctccaacggatttttttcatctaaaagacagggccatttattg
ggttttaattctgtttatgaacatggagagggtggaatgtcgggccacatagaagaactt
acactggcctttccattcgtaaataaagcaatccctgatatctatatgtcgaaggattca
attcttaacacttttaatgaaaagaaggatacacgtttcggcctggatacgcttggccgg
ccaacaaccgaccgttacttttacaatttcgatggcaggtatccgatctttagtaagatc
aaggtgattatggcaggctctgcctccacctcaactaccgatgctaaattcagcttcttt
tctagcatcgcgctttttacacgactagaggatatctacctgctgcgtgccgaggccagt
tccgtattaggtgatcgacaaggcgccataaacgatttaaataccatcaggtcaagtaga
gggctccctaattatagtgaagtaaccaacggactggtgattgatgccatttttaaggaa
cgaaaaagggaactgataggcgagggacattactggtttgatcaggtacgctacaataag
atcaggcaaaataatagtgtctttactgaactgatcaaaacaggaggtatatactggcct
gtgtccgaagaactacttcaacaaaataaattattaactcaaaatcaatattggaaataa
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