Pedobacter ginsengisoli: CPT03_20285
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Entry
CPT03_20285 CDS
T05145
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgs
Pedobacter ginsengisoli
Pathway
pgs00521
Streptomycin biosynthesis
pgs00523
Polyketide sugar unit biosynthesis
pgs00541
O-Antigen nucleotide sugar biosynthesis
pgs01100
Metabolic pathways
pgs01110
Biosynthesis of secondary metabolites
pgs01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pgs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CPT03_20285 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CPT03_20285 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CPT03_20285 (rfbC)
Enzymes [BR:
pgs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CPT03_20285 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ATP58636
UniProt:
A0A2D1UAI7
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All DBs
Position
complement(4826948..4827502)
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AA seq
184 aa
AA seq
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MNITETPIAGLLVIEPKVWKDNRGYFYESYNSKLFSEAGIDANFVQDNQSFSQKGALRGL
HAQRNPFEQGKLVRVLQGKVLDIAVDIRKQSDTYGQYFSLELSGDNHKQLWIPPGFLHGF
LTLENDTIFTYKVTNYYDKASEIGVIWNDADIDINWNSSIPEEELLLSEKDLVLPAFKDF
DNPF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaatattacagagacccccattgccggccttttggttattgagcccaaggtttggaaa
gacaatcgtggatatttttacgaaagctacaattcaaagttgttttccgaagcaggcatc
gatgctaactttgtccaagacaatcaatccttttctcaaaaaggtgctttacgtggactt
cacgctcaacggaacccatttgaacagggtaaattggtgcgagttttacaaggaaaagtt
ttagatatagcagttgatattagaaagcaatctgacacctatggccaatattttagtttg
gaactgagtggcgataaccataaacaattatggattcctccaggatttttacacggcttt
ttaactctagaaaatgatacaattttcacttacaaagtaactaattattatgataaagct
tccgaaatcggagtaatctggaatgacgctgatatcgacatcaactggaatagcagcatt
ccagaggaagaacttttgctctctgaaaaagatctggtattaccagctttcaaagatttc
gataatcctttttaa
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