Porphyromonas gingivalis TDC60: PGTDC60_0736
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Entry
PGTDC60_0736 CDS
T01516
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgt
Porphyromonas gingivalis TDC60
Pathway
pgt00521
Streptomycin biosynthesis
pgt00523
Polyketide sugar unit biosynthesis
pgt00541
O-Antigen nucleotide sugar biosynthesis
pgt01100
Metabolic pathways
pgt01110
Biosynthesis of secondary metabolites
pgt01250
Biosynthesis of nucleotide sugars
Module
pgt_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PGTDC60_0736 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PGTDC60_0736 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PGTDC60_0736 (rfbC)
Enzymes [BR:
pgt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PGTDC60_0736 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAK24900
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All DBs
Position
778693..779283
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AA seq
196 aa
AA seq
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MNFIPTEIPEVVILEPRLFRDDRGYFFESFSRQEIETGIRPINFVQDNESASRYGVLRGL
HFQKPPHAQSKLVRVVRGCVIDYAVDIRFGSPTFGKYVAVELSDTNFRQLFIPRGFAHGF
VVLSDEVVFQYKCDNYYAPQSEGAIAWNDSNLDIDWKIPAEDIILSAKDQANPSWTELIS
SEDFRNLFPYNQDLYE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatccccaccgaaatacccgaagtcgttatccttgagccgcgattgttccgt
gacgatcgaggctatttcttcgaatcattcagtcgccaagagatagaaacgggtattcgc
cccattaattttgtacaagacaacgaatcggcatcccgatatggtgtactaagagggctt
cacttccagaaacctccacatgctcagagcaagctggtgcgagtagtacgtgggtgtgtg
attgactatgccgtggatattcgcttcggatcgcctactttcggcaaatatgtagcagtg
gagctttccgatacgaacttcagacagttgtttatcccgcgcggattcgctcacggtttt
gtcgtgctaagtgacgaagtcgtatttcagtacaaatgcgacaactactatgctccacaa
agcgaaggagccattgcctggaatgattcgaacttagatattgactggaaaatccctgca
gaggacattatcctctcagctaaagatcaggccaatccgtcatggacggaattgatatcg
agcgaggatttccggaatctcttcccctacaatcaagacttatacgaatga
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