Pantherophis guttatus (corn snake): 117658754
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Entry
117658754 CDS
T07329
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut04512
ECM-receptor interaction
pgut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117658754 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117658754 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pgut00535
]
117658754 (AGRN)
Proteoglycans [BR:
pgut00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117658754 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
Laminin_EGF
EGF
SEA
CFAI_KAZAL
Laminin_G_3
hEGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
117658754
NCBI-ProteinID:
XP_060550158
EnsemblRapid:
ENSPGUG00005018172
UniProt:
A0A6P9AVW3
LinkDB
All DBs
Position
Unknown
AA seq
1964 aa
AA seq
DB search
MTACQYPVGPGSLDRDRMYQHKVSLVVRYFMIPCNICLILLATSTLGFAVLLFLNNYKPV
NYFPQAVPQDVCRGMLCGFGAACEKNPTDPSQGVCICKKATCPSVVAPVCGSDYSTYSNE
CELEKAQCNQQRRIKVMSKGACGSKDPCAEVVCSFGSTCVRSTDGQSAKCICMSFCSGLP
ENTVCGSDGKDYRSECHLNRHACDKQENIFKKFDGPCDPCKNTHNDMNRVCRVSPRSRRA
ELLPRPESCPLKKDPVCGDDGVTYENECVLQRTGAIRGIEIQKLRSGQCQVQDRCRDECR
FNAVCLIRRGLARCSCERVICDGAYQPLCGRDSRTYFNDCERQKAECQQKAAIPVKHHGP
CDLGKPSPCLSVECQYGATCVVKNQEAVCECQQVCQSVYDPVCGSDNLTYSNPCELDAMA
CALRKEIRVKHKGPCDRCRKCQFGAICEAETGRCVCPTECVASSQLVCGTDGNTYGSECE
LHVQSCIQQVSIEVAAQGSCKACGATVCSFGAKCVDGQCLCPRCEQQPSSRVCGSNGITY
NNECELRLAACQQKEELEVAKRGPCEDECGSGDGSGSGDAIECERDSCRKYGGSWDEDME
DDRCVCDYTCGTVPQNLVCGSDGVVYTNECELKKSRCEKRQDIYVASHGPCQGVPTLPSS
SPELLHCSKTVYGCCPDNVTLALGVGSAGCPSTCHCNPYGSYGGSCDPSTGQCSCKPGVG
GLKCDRCEPGFWNFRGIVTDRKSGCTPCHCDPVGSVRDDCEQMTGLCSCKTGITGTKCKQ
CPSGSKLGMSGCEKDLSAPSSCAEMTCEFGASCVEVNGLPQCECPSLLCTEADTSKVCGS
DGVTYGDQCQLRTIACRQGKIIEVKHLGQCTESHAGHPTPPATQRPLDSVPPLAPQITTL
APELTRTSSSPWHSEDYVSRQSQPVTRRITKPAILSTLPWTTQGIRQTTARPLLTAPVVP
AATQTAYIESGSAEGSGDPELGTSGDQEGSGTSSAGEEEIEDPKEPSTHLIERATCYNTP
LGCCSDGKTPAADAEGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSI
ESVLDELFRNSEVKRDFRSVQVRHLGQSSAVRVIVESHFDPATSYTAADIQRALLKQIKA
SKKKTILVKRPQQENIKFMDFDWIPQLFTTTTTTTIATTMAPTAASSQRFPNITTPRNFN
PGRMNGKSSGGATTKKPSTTLPTSTDRKKPMRPIPTTKKPLRPCDSHPCLHGGTCEDDGR
DFTCSCPAGKGGAVCEKSVRYFIPSFGGKSYLAFKMMKAYHTVRIAMEFRASELSGLLLY
NGQNRGKDFLSLALVNGFVELRFNTGSGTGVITSKVPVEPGQWHALVVNRNRRNGVLSVD
GEPHVHGESPSGTDGLNLDTDLFVGGAPEDQIAVMAERTSVTAGLKGCIRLLDVNNQMYD
LREKGDDVLYGSGVGECGNNPCQPNPCHHGGLCHTMEAEMFHCECLNGYTGPTCADERNP
CDPNPCHLSATCLVLPEGGSKCECPMGRGGEFCESVAEMDQTVPFLPEFNGFSYLELNGL
QTFVPDLQDKMTMEVAFLSRNPNGLIFYNGQKTDGKGDFISLALHNGYLEYRYDLGKGAA
VIKSREPIPLNSWVSVSLERNARKGIMRINNGERTLGESPLPHTSLNLKEPLYVGGAPDF
SQLARAAAVSASFDGAIQKISIKGTPVLKEENIRSAVEISPFRSHPCTQKPSPCQNRGTC
KPRLETYECTCPRGFFGTHCEKVLTEKAAGDSEAIAFDGRTYMEYHNAVTKSPDALDDHL
DLSEKALQSNYFELSIKTEATQGLILWSGKGLDRSDYIALAIVDGRVQMTYDLGSKPVIL
RSTVPINTNQWIQIKASRVHRDGSLQVGNESPVMGSSPLGATQLDTDGALWLGGLEKLSL
AHKLPKSFLTGFVGCIRDVVVDRQELHLVEDALNNPTILHCAAK
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctgccagtaccccgtggggccgggctccttggaccgagaccggatgtaccag
cacaaagtctccttggtggtccgttacttcatgatcccctgtaacatctgcctgattctc
ttagccacctccacgctgggatttgccgtcctgcttttcctcaacaattataaaccggtg
aattacttcccgcaggcagtgccccaagatgtttgtcgagggatgctgtgtggcttcggg
gccgcctgcgagaagaaccccacggacccttcccaaggtgtttgcatttgtaaaaaggcc
acctgcccttcggtggtggccccggtgtgcggatcggattactcgacctacagtaacgag
tgtgagctggagaaagctcagtgcaaccagcagcgtcgcattaaagtcatgagtaaggga
gcttgtggttcgaaagacccctgcgcagaggtagtctgcagcttcggcagcacgtgcgtc
cgatccacggatgggcagtcggccaaatgcatctgcatgtccttttgcagcggcctcccc
gaaaacaccgtctgcggcagcgacggcaaggactaccgcagcgagtgccacctgaaccga
cacgcctgcgacaagcaggaaaacatcttcaagaagttcgatgggccgtgcgatccttgc
aaaaacacccacaacgacatgaatagagtttgccgggtcagccctcgctcgcgacgggcc
gagttgctgcccaggcctgaaagctgccccttgaaaaaagacccggtgtgtggggatgat
ggagtgacatacgagaacgagtgcgtcttgcagaggacgggcgccatccggggcatcgag
atccagaagttgcgttcaggacagtgccaggttcaagacagatgccgggacgagtgccgt
ttcaacgccgtgtgcctgatccgccggggcctcgcccgctgctcctgcgaacgggtgatc
tgtgacggcgcctaccagcctctctgcggcagagacagccggacctacttcaacgactgc
gagcgccagaaggcggagtgccaacagaaagccgccattccggtcaagcaccatggacct
tgtgatcttggcaagccgagcccctgtttgagcgttgagtgccagtacggtgccacctgc
gtggtgaagaaccaggaggccgtgtgcgagtgtcagcaagtgtgccagagcgtctacgat
ccggtctgcggcagcgacaacctcacctacagtaacccttgcgagctggacgccatggcg
tgtgccctccggaaggagatccgggtgaaacacaagggcccatgtgaccgctgtcggaag
tgccagtttggtgccatctgcgaggccgagacgggcaggtgcgtgtgccccaccgaatgt
gtcgcctcctctcagctggtttgcggaaccgacgggaacacctacgggagcgagtgcgaa
ctccacgttcagtcctgcatccaacaggtttccatcgaggtggcagcccaaggcagctgt
aaagcctgtggggccaccgtgtgttccttcggggcaaagtgcgtggacgggcagtgcctc
tgcccccgttgcgagcaacagccctcgtcccgcgtctgcggaagcaacggcatcacgtac
aacaacgagtgcgagctgcgcctggcggcttgccagcagaaggaagagctggaggttgcg
aagaggggcccgtgcgaagacgagtgcggctcgggcgatgggtctggctccggagatgcc
atcgagtgcgagagagatagctgccggaagtacgggggttcatgggacgaggatatggaa
gatgaccgttgcgtgtgtgattatacctgtgggaccgtaccacagaacttggtgtgtggg
tcggacggggtagtctacacaaatgaatgtgaacttaaaaaatcccgctgcgagaaacgc
caggacatttacgtggcaagccacggaccctgccaaggggtcccaacgcttccgtcttct
tcgccagaactccttcactgtagtaaaaccgtttacggctgctgcccagacaatgtgacg
ttggcgctcggagttgggtcggctggatgccccagcacttgccactgtaacccctacggc
tcctacggagggagctgtgatcccagcacgggccagtgctcctgcaaacccggcgtcggg
gggctgaagtgcgaccgctgcgaacccggtttctggaacttccgcggcatcgtgacggac
aggaagagcggctgtaccccctgccactgcgatcctgtgggatccgtccgggatgactgc
gaacagatgaccggcttgtgttcgtgtaaaaccgggattacgggcaccaaatgcaaacag
tgtcccagcggaagcaagctgggaatgtccggttgtgagaaagatctctcggccccctca
tcctgcgccgaaatgacctgtgaattcggggcgtcgtgtgtggaagttaacggccttccc
cagtgtgagtgtccgtcattgctttgcacggaagctgacacctccaaggtctgtggctct
gacggagtgacctatggcgaccagtgccagttaaggaccattgcttgccggcagggaaag
atcatagaggtgaagcatttgggccagtgcacagaatctcatgccggccaccccaccccg
cctgcaacccaacggcctttggactctgttccccctctggcaccccaaatcacgactctg
gctcccgagctgaccaggacatcctcctctccttggcattcagaagactacgtttcccgc
cagagccagccggtcacccgaaggataaccaagcctgctatcctctccactcttccctgg
acgactcagggcatccgccagaccactgccagacccctcctgacagcccccgtggtccct
gctgccactcagacggcttacattgaatcgggcagcgcggaaggcagcggagatccagaa
ctgggcaccagtggtgatcaggaaggcagcgggaccagctcggcaggtgaggaagaaatt
gaagacccaaaggagccaagtacccacctgatcgagagagccacctgttacaacacccct
ctgggatgctgctcggacggcaagactccggccgctgacgccgaaggaagtaattgccca
gccaccaaagtcttccaaggggtcctgattttggaagaggtggaaggccaggagctcttt
tacaccccggaaatggccgatcccaaatcggagctttttggggagacggcccgaagcatc
gaaagtgtgctggatgagcttttccgcaactcggaggtgaagagggatttcaggagtgtc
caggtgcgacatctgggccaaagcagcgccgtcagggtcattgtggagtctcattttgac
ccagcgacttcttacacggctgctgacatccagagggcacttttgaagcagatcaaagcc
tctaagaagaaaacaatcttggtgaagagaccccagcaagagaacatcaagttcatggac
tttgactggatcccccagctcttcaccacgaccaccacgaccacgatcgccaccacgatg
gctcctacggccgccagctcccagaggttccccaacatcacgacaccccggaacttcaat
ccaggacggatgaatgggaaatcctctggaggagccaccaccaaaaagcccagcaccacc
cttccaacctctacagaccggaagaaacccatgcgccctatacccaccaccaagaagccc
ctgcggccctgtgactctcacccatgcttgcatggtggcacctgcgaggacgacggccga
gacttcacttgcagctgccctgcaggaaaaggaggagcggtttgtgagaaatccgtccga
tacttcatccccagctttggtgggaagtcctacctggcgttcaaaatgatgaaggcctat
cacaccgtacgtatcgccatggaattccgggcctccgagctgagcgggctgctcctgtac
aacgggcagaaccgtgggaaggacttcctctccctggcgctggtgaacggattcgtggag
ctcaggttcaacaccggctcggggacaggcgtgatcaccagcaaggtgcccgttgagcct
ggccagtggcatgcgcttgtggtcaatcggaaccggaggaacggcgtgctgtccgtggac
ggggagccccacgtgcatggcgagagcccaagtggaaccgacgggctgaatctcgacact
gatctctttgtcggaggggctccggaggaccaaattgctgtgatggccgagcgcacgtcg
gtcactgctggtctgaagggctgcatccgtctgttggatgtcaacaaccagatgtacgac
ctgcgagagaaaggcgacgatgtgctgtacggcagcggagtgggggagtgtggcaacaac
ccttgccagcccaatccgtgccaccacggcgggctctgccataccatggaagccgagatg
tttcactgcgagtgtctgaatggttatacaggacccacctgtgccgatgagaggaacccc
tgcgaccccaacccctgccacctctccgccacctgcttggtgttgccggaaggcggatcg
aaatgcgaatgccccatgggacgaggaggcgaattctgcgaatcagttgcagaaatggat
cagaccgtgcctttcctgccggaattcaacggattctcatacctggagctgaacggtctc
caaacatttgtgccagatctacaggataagatgaccatggaagttgcgttcctgagcaga
aaccccaacggtttaattttctacaatggacagaagacggatggcaaaggcgattttatc
tccttggcccttcacaatggatacctggagtacagatacgatctgggcaaaggagctgcc
gtcatcaagagcagagagcccatccctctgaatagctgggtcagtgtttcgctggagagg
aacgcacggaagggcatcatgagaatcaacaacggagaacggaccttgggtgaatcgccg
ttgccccacacctcacttaatttaaaggaacccctctacgtcgggggcgcaccggacttc
agccaactggctcgggctgccgcggtatctgctagctttgacggagccattcagaagatt
tccatcaaagggacccccgtcctgaaggaggagaacatccgcagcgctgttgagatttcg
cctttccgctcccatccctgcactcaaaagcccagcccatgccaaaacagagggacctgc
aaaccccgtctggaaacttacgaatgcacctgccccagaggcttcttcgggacccactgc
gagaaagttctcaccgagaaggcagccggagactcggaagccatcgcctttgacggcagg
acctacatggaataccacaacgccgttaccaagagtcccgatgctttggatgatcatttg
gacctcagtgagaaggctctgcagtccaactacttcgagctgagcatcaaaaccgaagcc
acccaaggtcttatcttgtggagcgggaagggcctagatcgatcggactacatcgctttg
gccatcgtggacggccgggtccaaatgacctatgacctcggctccaaacccgtgatcctg
cggtctaccgtcccaatcaacacgaaccagtggattcagatcaaagcgtccagagtccat
cgagatgggtccctacaagtcggcaacgagtctcccgttatgggttcctcgcctcttgga
gcaacccagctggatacagacggggccctttggctgggtgggttggagaagctcagcctg
gcccacaagcttcccaaatctttcctcaccggctttgtgggctgcatacgagacgtggtg
gtggatcgccaagaactccacctggtagaggacgctttaaacaaccccaccatattacac
tgcgcggccaaatga
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integrated database retrieval system
