Pantherophis guttatus (corn snake): 117663702
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Entry
117663702 CDS
T07329
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pgut
Pantherophis guttatus (corn snake)
Pathway
pgut03250
Viral life cycle - HIV-1
pgut04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pgut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117663702 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117663702 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgut03400
]
117663702 (SAMHD1)
DNA repair and recombination proteins [BR:
pgut03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117663702 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
PDEase_I
HD_assoc_2
Npa1
Motif
Other DBs
NCBI-GeneID:
117663702
NCBI-ProteinID:
XP_034269971
EnsemblRapid:
ENSPGUG00005008876
UniProt:
A0A6P9BP27
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MSNALKRARPTSSPDGFQTPQKRGVPAADLAGSVSLHPRSWDTEQLCAFLQTQGLEAAEL
QCFREHKITGSTVPYLTESHLEKMGICAVGVKQKLLICVRKLAQSQSYTEITKVFNDPIH
GHIEMHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVSHLAGRLVQALQ
ERQPELNIDQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGLTWKHEQASVQMFEH
LIDSNNLKPDMEQYGLKLDEDIHFIKEQIASPVEEERGDKEWPYHGRSKNKSFLYEIVAN
KTSGIDVDKWDYFARDCHHLGIQNNFDYERFIKFARVCQVKDMMHICTRDKEVGNLYDMF
HTRNCLHRRAYQHKVSNIIETMITDAFLKADPHIKIKGSGGKVFQISTALEDMQAYTKLT
DEIFLKILHSDEPELSDAREILCKIQQRDLFKCLGETQPPEGKEIKKEDYDGLCAEIVNS
KPKTISEDVELKAEDFIVHVIDMDYGMKKRNPINSVRFYCKTDITQAVKITREQVSKLLP
EKFAEQLIRVYCKKKDAKIIEAATKYFIQWCMDKDFTKPRDGDVVAPELTPMKKGWNKDD
ENQDSNRNSSGLKCKVNLNF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgcccttaaacgggcccggcccaccagctcccccgatggcttccagacgcct
caaaagcgcggcgttcccgctgcggatttggcgggttccgttagcctccatcctcggtcc
tgggatacggagcagctgtgcgccttccttcagactcagggcttggaagctgcggagctg
caatgctttcgagaacataaaataactggttcaactgtaccatatctcactgaatctcat
cttgaaaaaatgggaatttgtgctgtaggagtgaaacagaagctgctaatctgtgtgcgc
aaactggcacaaagtcaaagttacactgaaataacaaaggtatttaatgatccaatccat
ggtcatattgaaatgcatcctcttcttgttcgcatcattgacacacctcaatttcagcgt
ctacgatatattaaacagttgggtggcacttactatgttttcccaggagcatcacacaat
cgctttgaacattctcttggcgttagtcatctcgcaggccgtttggtgcaggcattgcaa
gaacgacaacctgaattgaatattgatcagagggatattctctgtgttcaaattgctgga
ctttgtcatgacttgggccatggaccattttcacatatgtttgatggaagattcattcca
cttgctcgcccaggattgacatggaagcatgagcaggcttccgttcagatgtttgaacac
ttaattgattccaataacttaaaaccagacatggaacagtatggtctcaagcttgatgaa
gacatacattttatcaaagaacagatagcaagtcctgttgaggaggaaaggggggacaaa
gagtggccctatcatggtcgttccaaaaacaagagttttctttatgaaatagtggctaac
aaaacaagtggcattgatgttgataaatgggactactttgctagggattgtcatcatctt
ggaattcaaaacaattttgactatgagcgcttcattaaatttgctcgggtgtgccaagtg
aaagatatgatgcatatttgtacccgtgacaaggaggttggaaatttatatgacatgttc
cacacacgaaactgtctgcaccgcagagcatatcagcataaagttagcaacattattgaa
accatgattactgatgcctttctaaaggctgatccacatatcaaaataaagggctcaggt
ggaaaagtgttccagatctctacagcactggaagacatgcaagcctacaccaagctgaca
gatgaaatctttttgaagattctacattctgatgaaccagagctgagtgatgcacgcgaa
attctgtgtaaaatacagcagcgcgatctctttaaatgcttgggagaaacgcagccacca
gagggcaaggaaattaaaaaggaagattatgatggattgtgtgctgaaattgttaattcc
aaacctaagacaatctctgaagatgtggagctgaaggctgaagattttattgttcatgtt
attgatatggattatggaatgaaaaaaaggaaccccattaacagtgttcgtttttactgc
aagactgacatcactcaggcagttaaaattacaagagaacaagtttcaaagctgctccca
gaaaagtttgcagagcagctcatcagagtttattgtaaaaaaaaggatgcaaagataatt
gaggctgctacaaaatattttattcagtggtgtatggataaggatttcactaaaccacgg
gatggtgatgtggttgctccagaacttactccaatgaaaaaagggtggaataaggatgat
gaaaatcaggattcaaacaggaacagtagtggtttaaagtgtaaagtaaatttaaatttt
taa
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