Polymorphum gilvum: SL003B_1233
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Entry
SL003B_1233 CDS
T01458
Symbol
uvrB
Name
(GenBank) Helicase subunit of the DNA excision repair complex
KO
K03702
excinuclease ABC subunit B
Organism
pgv
Polymorphum gilvum
Pathway
pgv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SL003B_1233 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgv03400
]
SL003B_1233 (uvrB)
DNA repair and recombination proteins [BR:
pgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SL003B_1233 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SL003B_1233 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
AAA_16
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ADZ69662
UniProt:
F2J0J4
LinkDB
All DBs
Position
complement(1319816..1322995)
Genome browser
AA seq
1059 aa
AA seq
DB search
MARTPTSRPPQHAAPDSAPDSAPDIDPDIDPDAPDTTSGAADGFGEAPQRALSGAPLSGS
VADWAREIAAEADVPARKGNSVRAEAPHARTNDAPDGAPRGRTASGSGRSSASAKKEKPT
KSARGTSMGKADTARERAAGGLNPVAGLDISLEEAEQLEQRLKQHQKDTRKKRKDSKFGE
LGGNQGATATVAALSALIESGNPLHKNGDIWVPHRPERPAKSEGGVPIKLVSEYEPAGDQ
PTAIAELVGGVESGEQTQVLLGVTGSGKTYTMAQVIARTQRPALILAPNKTLAAQLYGEF
KSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSVNEQIDRMRHAATRALLERDDVI
IVASVSCIYGIGSVETYTAMTFALEVGERIDQRQLLADLVALQYKRNDAAFQRGSFRVRG
DTVELFPAHYEDRAWRISLFGDEVEAITEFDPLTGKKSGEMKSVKIYANSHYVTPKPTLA
QAIKSIKAELKTRLDELNAHGRLLEAQRLEQRTIFDLEMLEATGSCAGIENYSRYLTGRA
PGEPPPTLFEYLPDDALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPL
RFEEWNAMRPQTVCVSATPGSWEMEQSGGVFAEQVIRPTGLVDPPVDIRPASSQVDDLLG
EVRAVAAKGYRTLVTTLTKRMAEDLTEYLHENGVRVRYMHSDIDTLERIEIIRDLRLGAF
DVLVGINLLREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADTM
TGSMERAIAETNRRRDKQLAYNAEHGITPESVKRSIADILDSVYEQDHVTVDAGFAEAGS
LVGHNLKAHIESLEKRMREAAADLEFETAARLRDEIKRLQETELALADDPLARQESIDDR
TGGYRGDKKYGAGGTKAGASGKKRETAADRARAAKSRNAATAGLSGENGPGQGPASQTGA
APDGAPSRRTGSASDRAPVSANQSSEEVPSPSSKVRKNTLDEMTVGRTEVPLSDKPLPKK
PEDDVKPVVRGRIGVGSYEDPAEERQRRGRPKKSGRPGR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcacaccgacctcccgcccgccccagcacgccgccccggacagtgccccggac
agtgccccggacatcgacccggacatcgacccggacgccccggataccacctccggcgct
gcggacggtttcggcgaggcgccgcaacgcgcactgtccggcgcgccgctttcaggctcc
gtcgccgactgggcacgggagatcgccgccgaggcggacgtacccgcacgcaaaggcaac
tcggtccgggccgaagctccgcacgcccgaacgaacgacgcgcccgatggcgcaccccga
ggcaggacggcaagcggaagcgggcgctcgtccgcaagcgccaagaaggaaaagccgacg
aagtcggcccgcggcacctccatgggcaaggccgacacggcccgcgaacgggccgccggc
ggcctcaatccggtcgcgggcctcgacatctcgctggaagaggccgagcagctcgagcag
cggctgaagcagcaccagaaggacaccaggaagaaaaggaaggacagcaagttcggcgag
ctcggcggcaatcagggcgccaccgccaccgtcgccgccctgtcggcgctgatcgaaagc
ggcaatccgctgcacaagaacggcgacatctgggtgccgcaccggccggagcggccggcc
aagtcggaaggcggcgtgccgatcaagctggtctccgaatatgagccggccggcgaccag
ccgaccgccatcgccgaactggtcggcggcgtggagagcggcgagcagacccaggtgctc
ctgggcgtcaccggctcgggcaagacctacaccatggcccaggtcatcgcccgcacccag
cgcccggcgctgatcctggcgccgaacaagacgctcgccgcccagctctacggcgaattc
aagagcttcttcccggacaatgcggtcgagtatttcgtctcttactacgactactaccag
ccggaggcctacgtcccgcgcaccgacacctacatcgagaaggaatcctcggtaaacgag
cagatcgaccgcatgcgccacgcggcgacgcgcgccctgctcgaacgcgacgacgtcatc
atcgtcgcctcggtgtcctgcatctacggcatcggctcggtcgagacctacaccgccatg
accttcgcgctggaggtcggcgagcgcatcgaccagcgccagttgctcgccgacctggtc
gcgctgcagtacaagcgcaacgacgccgccttccagcgcggcagcttccgcgtgcgcggc
gacaccgtcgagctgttcccggcccactacgaggaccgcgcctggcgcatctcgctgttc
ggcgacgaggtcgaggcgatcaccgagttcgacccgctgacgggcaagaagtccggcgag
atgaagtcggtcaagatctacgccaactcgcactacgtcacgcccaagccgacgctcgcc
caggcgatcaagtcgatcaaggccgagctgaagacccgcctggacgagctcaacgcccac
ggccgcctgctcgaggcgcagcggctggaacagcgcacgatcttcgacctggagatgctg
gaggcgaccggctcctgcgccggcatcgagaactactcgcgctacctcaccggccgcgcc
cccggcgaaccgccgccgaccctgttcgaatacctgcccgacgacgcgctcgtgttcatc
gacgagagccacgtcaccgtgccgcagatcggcggcatgtaccgcggcgacttccgccgc
aaggcgacgctggccgaatacggcttccgcctgccgtcgtgcatggacaaccggccgctg
cgcttcgaggaatggaacgccatgcggccgcagacggtctgcgtctcggccacgcccggc
agctgggagatggagcagtccggcggcgtcttcgccgagcaggtcatccgcccgaccggc
ctggtcgacccgccggtcgacatccgccccgcctcgtcgcaggtcgacgatcttttggga
gaagtgcgcgccgtcgccgcgaaggggtatcggaccctcgtgaccacgctgaccaagcgc
atggccgaggacctgaccgaatacctgcacgagaacggcgtgcgcgtgcgctacatgcac
tccgacatcgacacgctggagcgcatcgagatcatccgcgacctccgtctgggcgccttc
gacgtcctcgtcggcatcaacctcttgcgcgagggcctcgacattcccgaatgcgcgctg
gtcgccatcctcgacgccgacaaggagggcttcctgcgctccgagacctcgctgatccag
accatcggccgcgccgcgcgcaacgtcgacggaaaggtgatcctctatgccgacaccatg
accggctcgatggagcgcgccatcgccgagaccaaccgccggcgcgacaagcagctcgcc
tacaacgccgagcacggcatcacgccggaatcggtcaagcgctccatcgccgacatcctc
gactcggtctacgagcaggaccacgtcaccgtcgacgccggcttcgccgaggcgggcagc
ctggtcgggcacaacctcaaggcccacatcgagagcctggaaaagcggatgcgcgaggcc
gccgcagacctcgaattcgagaccgccgcgcgcctgcgcgacgagatcaagcgcctgcag
gaaaccgaactggcgctggccgacgacccgctggcccgccaggagagcatcgacgaccgg
accggcggctaccgcggcgacaagaaatacggcgccggcgggaccaaggccggcgccagc
ggcaagaaacgcgaaaccgccgccgaccgggcaagagccgcaaagtccaggaacgcggca
accgcaggcctgtcaggggaaaatggtccgggccaagggcccgcaagccaaacaggcgcc
gcgcctgatggcgcgccctcgcggaggacagggagcgccagcgaccgcgcgcccgtgagc
gcaaaccagagctctgaagaggtcccttccccaagctcaaaggtccgaaaaaataccctc
gacgagatgaccgtcggccgcaccgaggtgccgctgtccgacaagccgctgccgaagaag
cccgaggacgacgtcaaaccggtcgtgcgcggcaggatcggcgtggggtcttacgaggat
ccggcggaggaacggcagagaagaggccggccgaagaagagcgggcgtccggggcggtaa
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