Pectinophora gossypiella (pink bollworm): 126379535
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Entry
126379535 CDS
T09293
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pgw
Pectinophora gossypiella (pink bollworm)
Brite
KEGG Orthology (KO) [BR:
pgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgw03019
]
126379535
03041 Spliceosome [BR:
pgw03041
]
126379535
Messenger RNA biogenesis [BR:
pgw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126379535
Spliceosome [BR:
pgw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
126379535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
MARF1_RRM1
Motif
Other DBs
NCBI-GeneID:
126379535
NCBI-ProteinID:
XP_049884284
EnsemblRapid:
LOC126379535
LinkDB
All DBs
Position
29:complement(5526828..5595710)
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AA seq
377 aa
AA seq
DB search
MLTMSTLMMPAATMTTMTNAGPIPVAAASKLEPAKLLQLPHGALLPQVPQQPPPHHPQHH
PHHNNKLEHYHIFVGDLSPEIETQSLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLK
KSEAESAITAMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYC
GGLTTGLTEDLMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDVNGQP
VKCSWGKESGDPNNAQAQGQLGGTAYSPFGAAYTAGGVPPTSYWYNTYPQQLGGFLQGVQ
GYSYAGQFAGYQQQYMGMGGVQLPWALGGGVGGVGGVGGVGGVAAMSQPPQVLHYPLQHF
QVQPIGEDEWLAPSLLV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccatgtctacactcatgatgccagctgctacgatgaccacaatgacgaatgct
ggaccgatccccgtggctgcagccagcaagctggagccagcgaagctgctgcagctgccg
cacggagccctattgccgcaggttcctcagcagccgcctcctcatcaccctcagcaccat
ccgcaccacaacaacaagcttgaacactaccacatcttcgtcggcgatttgagtcctgaa
attgaaacgcaaagcttaagagacgccttcgcgcccttcggagaaatttcggactgccgg
gtggtgagggaccctcagaccctcaaatcaaaaggatatggattcgtatcgtttttgaaa
aaatcagaagcggagtctgcgatcacggccatgaacgggcagtggttgggttcacgctcc
attcgcaccaactgggcaacccggaaaccaccagcgccgaaaaatgaattgaactccaag
cccctgaccttcgacgaggtctacaaccagagctcaccgaccaactgcacggtgtactgc
ggaggtctcacgactggtctcacggaggacctcatgcagaagaccttccagcccttcggc
accatccaggagatacgcgtcttcaaagacaagggatatgccttcatcagattttccacg
aaagagagcgcgacccacgccatagtagcggtccacaacacggacgtcaacggtcagcct
gtgaagtgttcgtgggggaaggagtcgggagacccgaataacgcacaggctcagggacag
ctcggtggcacagcgtacagcccattcggcgccgcgtacacggctgggggggtacccccc
acctcatactggtacaacacgtacccccaacaactagggggcttcctgcagggggtacag
gggtactcttacgccggacagttcgcgggataccagcagcagtatatgggcatgggcggc
gtgcaactgccgtgggcgctgggcggcggcgtgggcggtgtgggcggcgtgggcggcgtg
gggggagtcgcggccatgtctcagccaccgcaggtgctgcactacccgctgcagcacttc
caagtgcagcctatcggggaggatgagtggctggcccccagcctcctggtgtga
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