Panicum hallii (Hall's panicgrass): 112874237
Help
Entry
112874237 CDS
T07366
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112874237
Membrane trafficking [BR:
phai04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112874237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
112874237
NCBI-ProteinID:
XP_025793234
LinkDB
All DBs
Position
9:complement(3403688..3418112)
Genome browser
AA seq
1277 aa
AA seq
DB search
MDPLRSYLGRLLLEEITPVVMVLTTPLAEAACRKSGLSFVDMLSPFSLFKKIDVPVRTAS
EVPYRLQMFKIRMVYASDVQKEDYEVSDERIKPVVSEANEKALPDLLSDPPQLEDVLGKP
KAELCPLWIKKFNRELMRTLSFSEHETFDHPVACLLVVSSMDKEPISKFVDLFNTNQLPS
LLNEGIMDPQILKHYLVLHDQQEGPQDIAVNILAEMRSTLGLNDCKLLCINSSTEADGSN
PDNTWLPYTALGLENREGTSFLSTDDLNEIKDFMQDFASNHIIPYMEQKIRVLNQQVATT
RKGFRNQIKNLWWRKRDDVPEAPNGPMYTFTSIESQIRVLGDFAFMLRDYELALSNYRLL
ATDYKLDKAWKRFAGVQEMSGLCYFMLDQSRKDAEYCMENAFSTYLRIGSSGQRNATRCG
LWWAEMLKTREQYREASSVYFRVSNEEPSLHSAVLLEQAASCYLLSSPPMLRKYGFHLIL
AGNSYYMSDQRQHAVRAYRNALFVYKQNPWSYINDHVHFNVGRWYGVLGILDVAIKHLLE
VIACSHQSLITQNMFLSDFFHYVQSMGKKFDVYKLQLPVFNMSSLRVIHEDHRTYASDAD
VDVSEGTWQELEEELIPSSSVVRTNWLDTQPKSSLRKYKDSCVCVAGEAVKVNVELKNPL
QIPVDVSGISLICQLSTNLDALSFDVSGLTLDAGEDKVNAEPSVSILETDEDNFIVSKLD
IILGGGESKIVQLDVTPKVEGILKLVGVRWTLSNSVVGYQYFEFGAQKKNKKGKRGRRRS
FNNSLVVIKGLPKLTGSIDRMPTKAFAGDLQLLKLNLRNLSQFAVKGIKMKISNPRFVIP
GDSPDIDLEFPDCLKKHTQSEINLVPYKSMKENFKGLLFAFPQDIEIQAGGTLSWPIWFH
AATPGNVSLYISLYSEMESSCDIKYRTLRMHYNLEVLPSLDISFAISKSSSRLQEYIVRM
DVMNKTPSESFVLHQLSCVGSKWAVSALSSCNSISSVETVSANQAVSCFFKIKDFEADSC
KESESGSYRSDMALYPGSNGDVFDIARSPLADFHFQERYRQGKLAKVTCSLLDFVLISKA
AGYSSKPSPDLQLLSHHTCHCSALSQSPIWWLMEGPRAITHDFSKSCCEVSIQLVIHNSA
AHKSSVRVVTSDVMPEKSQTVHPHDSTSVQGGWHDVSLENDIKAISSAKGTRHEKQSSKS
ISPYVWCSLSSAQIELQPDSCSRVPLKVCIFAPGTYNFSNYELQWKVLPSKEAQVDENGS
SGGGPGHPFYVTVLQSV
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctccggagctacctggggcggctcctcctcgaagagatcaccccggtggtg
atggtgctgacaacaccgctcgccgaggccgcctgccgaaagagcggcctcagcttcgtc
gacatgctctccccgttctcgctcttcaaaaaaatcgacgtgcccgtgcggacggcgagc
gaggtgccttacaggctgcagatgtttaagattcgcatggtttacgcgtccgacgtccag
aaggaggactacgaggtgtcagacgagcggattaagccggtggtttctgaggccaatgag
aaggctcttccggatttgctttcagacccgccgcagcttgaagatgtacttggaaagcct
aaagctgagctgtgcccactgtggattaagaagttcaatagagagctaatgcgaacacta
tcgttttcggagcatgagacatttgaccatcctgtggcatgtcttctagttgtgtcgtca
atggacaaagaacccatcagcaaatttgttgatctgttcaacacaaatcagttgccttct
cttttgaatgaaggcataatggatccacaaattttgaagcattacctcgtacttcatgac
caacaagaggggccgcaagacatagcggtgaacatcttagctgaaatgaggagtaccctt
ggtttgaacgactgtaaattattatgtataaattcgtctacagaagcagatggtagtaat
cctgacaatacgtggctaccttatacagctcttggtttggagaatcgtgaagggacctct
ttccttagcacggatgatttgaatgagataaaggacttcatgcaagattttgcttctaat
catatcatcccctacatggagcaaaagatacgtgtcctcaatcagcaggtagccacaacc
agaaagggttttagaaatcaaatcaagaacttgtggtggagaaagagagatgatgtccca
gaagctccaaatgggccaatgtatacgttcacctccatagaatcacaaatcagagttctg
ggtgattttgcgttcatgttacgagactacgagcttgctttgtcaaattacagattactc
gctacagattataagcttgataaggcttggaagcggtttgctggtgtacaggagatgagt
ggactctgctatttcatgctggatcagtcaaggaaggatgccgagtattgcatggaaaat
gctttcagtacatatttgagaattggatcttctgggcagagaaatgctactagatgtggc
ctttggtgggcagaaatgcttaaaacaagagagcagtacagggaggcatcaagtgtgtat
ttccgtgtttctaatgaggaaccttctttgcattctgccgtcctgcttgagcaagccgct
tcttgctacttattatccagtccacctatgcttcggaagtacggttttcacctaatctta
gctgggaatagctactacatgtctgatcagagacaacatgctgtacgggcatacagaaat
gctctgtttgtttacaaacaaaacccttggagttacatcaacgatcatgtacattttaat
gttggaaggtggtatggagttcttggtatacttgatgtagccatcaagcacttgctggag
gtcattgcttgtagccatcagtcgctgattacacaaaatatgttcctcagcgattttttc
cattatgttcagagcatgggaaagaaatttgatgtatacaagcttcaacttcctgttttt
aacatgtcatcgctcagagttatacatgaagatcatcgcacatatgcatcagatgcagat
gttgatgttagtgaaggcacttggcaggagctggaggaagaattgatcccatcatcatca
gttgtcagaactaactggctggatacccagccaaaatcttctttgagaaaatacaaggat
tcctgtgtttgtgtggctggagaagctgtaaaagtgaacgttgagcttaagaatcctctg
caaattcctgttgatgtttctggcatctctcttatatgccaactttccaccaatttggat
gctttaagttttgatgtaagtgggttgaccttggatgccggtgaagataaggttaacgca
gagccatctgtttcaatattggagactgatgaagataacttcatagtgtcaaagcttgac
atcatattaggaggaggtgaaagtaaaatagtgcaacttgatgttactccaaaagttgaa
ggtatcctgaagttggttggggtaaggtggacactttcaaattcagtagtaggttatcaa
tactttgaatttggtgctcaaaagaaaaacaagaaaggaaaaagaggccgtcgtcgttct
tttaacaacagcctggttgtaatcaagggtttaccaaaactcacaggatctattgatcgc
atgccgacaaaagcatttgctggtgatttacagctgctcaagctaaatctgagaaacctt
tcacaatttgctgtgaagggcataaaaatgaagatcagcaacccaagatttgtaattcct
ggtgattcaccggacattgaccttgagttcccagactgcttaaaaaaacacacgcaatca
gaaatcaatcttgtaccatacaaaagcatgaaggaaaattttaagggtttgctctttgca
tttcctcaggatattgaaattcaagcaggtggaacactctcttggcctatttggtttcat
gctgcaactcccggaaatgtttctctttatatatccctatattctgaaatggagagttcc
tgtgatataaaataccgtacactccgcatgcattacaatcttgaggttttgccatctctt
gacatatcctttgctataagcaagtcctcatcaagattgcaagagtatattgttcgcatg
gatgtaatgaacaagaccccatcagagtcatttgtacttcatcagttgtcatgtgttggc
agtaaatgggcagtttcagcgttgtcttcatgcaattcgatcagctctgttgaaacagta
tcagcaaatcaggctgtatcatgcttcttcaagattaaggatttcgaggctgattcctgt
aaggagtcagaaagcggttcctacagaagtgatatggctttatatccagggagcaacgga
gatgtgtttgacattgctcggtctcctttagctgattttcactttcaagaaagatacagg
caaggaaagttagcaaaggtgacatgcagccttcttgattttgttctgatttcgaaggca
gctggttactcgtcaaagccttctccagatttgcaactactttctcatcacacatgtcat
tgcagtgctcttagccagagccctatatggtggcttatggaaggacctcgagcaattact
catgatttttcgaagtcttgctgtgaggttagcatccagttggtgattcacaattcagca
gcacataagagttcggtgagagtggttacttctgatgtcatgccagagaaaagccaaact
gtccatccacatgattctaccagtgttcagggtggatggcatgatgtatcgctggaaaat
gacataaaggcgatctctagtgccaagggtacacgtcatgagaagcaatcttcaaagagc
atttcaccgtatgtttggtgttcattaagttctgctcaaattgagctccaaccagacagt
tgttctagagttcctctaaaagtatgcatattcgcaccgggtacatacaatttttccaat
tatgagctgcaatggaaagtgcttccatcaaaggaagcgcaagtggatgaaaatgggtca
tccggtggtggtccaggacatcctttctacgttactgtacttcaaagtgtctag
DBGET
integrated database retrieval system
