Panicum hallii (Hall's panicgrass): 112884431
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Entry
112884431 CDS
T07366
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112884431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phai03032
]
112884431
03400 DNA repair and recombination proteins [BR:
phai03400
]
112884431
Enzymes [BR:
phai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112884431
DNA replication proteins [BR:
phai03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112884431
DNA repair and recombination proteins [BR:
phai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
112884431
Bloom's syndrome complex (BTR)
112884431
FA (Fanconi anemia) pathway
112884431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
112884431
NCBI-ProteinID:
XP_025805602
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All DBs
Position
1:complement(57339619..57344873)
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AA seq
749 aa
AA seq
DB search
MKGVLPIKGASAASGREKKAPKELENVLNQYFGYSGFRGKQLEAIEAVLSGRDCFCLMPT
GGGKSMCYQIPALVRAGIVLVISPLIALMENQVASLKNKGIPAEFLSSTQTSHTKQTIHE
DLDSGKPSLKLLYVTPELVVTPGFMAKLKKLYHRGLLGLVAIDEAHCISTWGHDFRPSYR
KLSSLRKQFPDIPLLALTATAVPKVQKDVISSLCLQNPVILQASFNRPNIFYEVRYKDLL
DDVYSDISNLLKSSGNVCSIIYCLERAACDDLSMHLSQQGVSSAAYHAGLNSKVRSSVLD
DWLSSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQESGRAGRDQQPSRSVLYY
GLDDRRKMEFILRNTKTKKSQLSSSSNELSEKALADFSQIVDYCESSSCRRKKIIESFGE
KVQPTLCQRSCDACKHPNLVSSRLEELRRVPNCRFNKISPVFQSSLVNPAHLDTEFWNRE
DEASISAEDISDSDDGNEVVSNIAISKIPSNAALDAKFKALERAENAYYQGKGQTKQQGG
LVDKKSISQALRDACWKRLLDALGQAKLRLGNLPCDEAASATHLETECFKKYEKVGKTFY
NSQIAATVRWLSSATSNQMHDRFHTLIDQATDHSVSSSPDIVPESPPAPTEVVSASPGET
ISYEANDKPQNIHDLEKTKHSNESAKTIVASAGNMELPTIPSFREFLSQKGKDRAKSSSH
SNAGSQPSGFRRKSSGLVEKQESSKKMKS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagtacttcccattaagggtgcatcggcggcctcagggcgtgaaaagaaagct
cctaaggagcttgagaatgtcttgaaccaatattttggatattcaggatttcgaggaaaa
caactcgaagctatcgaagctgttttatcaggacgagattgcttttgtttgatgccgact
ggaggtggaaagtcgatgtgctatcagattccagctctagttagggcaggcattgttctt
gttatttcacccttgatagcactgatggagaaccaggttgcgagcctgaaaaataaagga
attccagctgaatttctctcttcaactcagacatctcacacaaaacaaacaatacatgaa
gaccttgattctggtaaaccttccttaaagttgctatatgtcactcctgagcttgttgtg
acacctggtttcatggcaaagcttaagaagctctaccatagaggtcttcttggtcttgtt
gctattgatgaggctcactgtatttcaacttggggccatgatttcagacctagttaccgg
aagctttcatcattgaggaagcagttcccagatatccctttgttagctttgacagcaact
gctgtcccaaaagtccagaaagatgtcatatcatcattgtgcctgcaaaatccagtaatt
cttcaggcatcatttaatcgacctaatatattctatgaagttcgttacaaggatcttctt
gatgatgtttattctgatatatcaaatttactgaagtcaagtggaaacgtttgctcaatt
atatattgtcttgaacgggcagcttgtgatgatctaagcatgcatttgtcacagcagggt
gtctcttctgctgcttatcatgctggcctaaatagcaaagtgcgaagttctgttcttgat
gactggctttcatcgagaactcaagttgtagtggcaactgtagcatttggaatgggtatt
gatagacaagatgtccgtattgtgtgccacttcaacttgcctaagtcaatggaatccttc
taccaggagtcaggacgagctggtcgtgatcaacagccttccaggagtgttttgtattat
ggattagatgatcggaggaaaatggagtttattttgagaaacaccaaaactaagaaatcg
cagttgtcttcctcttcgaatgagctttcggagaaggccctagctgacttcagtcagatt
gttgactactgtgaaagttctagctgccggcgaaaaaagattattgagagctttggagag
aaagtacaaccaactttgtgccaacgctcatgcgatgcttgcaagcacccaaatctggtg
tcctcacgtctggaggaacttcgtcgcgtgcccaactgtcgctttaataagatctctccg
gtgtttcaaagctcactagttaatccagcacacttggacacagaattctggaatcgtgaa
gatgaggcaagcatatcagctgaagacatatcagattctgatgatgggaatgaggtagtg
agtaatattgccatttcaaagattccatcaaatgctgccctggatgcaaaatttaaagcc
ctggagcgtgctgaaaatgcttattatcaaggcaaaggtcagaccaagcagcagggtggc
cttgttgacaagaaaagcatctctcaggcgttaagagatgcatgctggaaaagattgttg
gatgcccttggacaagcaaagctgcgacttggaaatctaccatgcgatgaggccgcctct
gccacacaccttgaaacagagtgcttcaaaaagtatgagaaagtgggtaagacattctac
aactcacagattgctgctacagtacggtggctgtcatctgcaacatccaaccagatgcat
gatcgtttccacacactcattgatcaagctacagatcatagtgtgtcaagctcccctgac
atcgtcccagaatcacctccagcacctactgaagtcgtcagcgcaagcccaggagaaacc
attagctacgaagctaatgacaaaccgcagaatattcatgacttggaaaagacgaagcat
tccaatgagtctgcaaagactattgtagcttcagctggaaacatggagctccccacaata
ccatcgttcagagaattcttgagccaaaaaggaaaggatcgtgcaaagagttcttcacat
tctaatgcggggagccagccttctggtttccgtaggaaatctagtggtctagttgagaag
caagaaagcagcaagaagatgaaatcgtga
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