Panicum hallii (Hall's panicgrass): 112884453
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Entry
112884453 CDS
T07366
Name
(RefSeq) beta-galactosidase 8 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai00052
Galactose metabolism
phai00511
Other glycan degradation
phai00531
Glycosaminoglycan degradation
phai00600
Sphingolipid metabolism
phai00604
Glycosphingolipid biosynthesis - ganglio series
phai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
112884453
09103 Lipid metabolism
00600 Sphingolipid metabolism
112884453
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
112884453
00604 Glycosphingolipid biosynthesis - ganglio series
112884453
00511 Other glycan degradation
112884453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112884453
Enzymes [BR:
phai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
112884453
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112884453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
OxoDH_E1alpha_N
Motif
Other DBs
NCBI-GeneID:
112884453
NCBI-ProteinID:
XP_025805622
LinkDB
All DBs
Position
3:12992819..13004355
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AA seq
678 aa
AA seq
DB search
MASGGAFHNLLLAVLLYLALTSSVGGEASRRFWIENDTFMKDGAPFQIVGGDVHYFRIVP
EYWKDRLLRAKALGLNTIQTYVPWNLHEPEPQSWDFKGFADLESYLRLAQELGMLVMLRV
GPYICGEWDLGGLPPWLLTVEPSLKLRSSDSTYLSLVGRWWGVLLPKVAPLLYSNGGPII
MVQIENEFGSFGDDKNYLHYLVQLARRYLGNDIVLYTTDGGAMGNLKNGSISQDDVFAAV
DFETGSNPWPIFRLQKKFNLPGKSAPLSSEFYTGWLTHWGESMATTDATSTAKALKTILC
HNGSAVLYMAHGGTNFGFYNGANTGQDEFDYKPDLTSYDYDAPIKEHGDVHNSKYKALRR
VIHECTGSPLRPLPSDIEKANYGLVKLQKVASLFDIIDNISDPLKGAVSEHPLSMEQIGQ
MFGFLLYMSEYQGKLPSSILSIPKVHDRAQVFLSCSTDSVRNLRYAGVIERWSSKTLEIP
NLGCSSNTSLYILVENMGRTNYGPYIFDRKGILSPIQLDGITLCHWKMYPLTFSSLDNLP
KLQLVTQMPDIRASKESVIHGHSEKKLQESLFYSNESASAEPEFYEGHFHIDSESEIKDT
FILFRGWNKGVAFVNNFNIGRFWPFFFQARGPQCALYVPAPILRPGDNIIVIFELHGPNP
ELTVNLVTDPDFTCGPKQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggtggagccttccacaaccttctcctggcggtcctcctctacctcgcgctc
acctcgtcggtcggtggcgaggcgtcgagaagattctggatcgagaatgataccttcatg
aaggatggggcgccgttccagatcgtcggcggcgacgtgcactacttccgcattgttcct
gagtactggaaggatcgccttttaagagcaaaggcactaggcttgaacacaattcaaaca
tatgtaccttggaatctgcatgagccagaaccacagagttgggatttcaagggctttgca
gatcttgaatcatatctgagacttgctcaagaattaggaatgctggtcatgcttcgtgta
ggtccatacatctgtggagaatgggacttaggaggtttgccaccttggttgctcactgta
gaaccttcccttaaactgcgatcatcagattcgacatatctctccttggtggggagatgg
tggggagtactacttccgaaagtggcaccattattatacagcaatggaggtccaattatt
atggttcagattgaaaatgaatttggttcatttggagatgacaagaattaccttcattac
cttgttcaactggctagaagatatcttggaaacgacattgttctttatacaactgatgga
ggcgccatgggcaatttaaagaatggatcgatttctcaagatgatgtttttgctgctgtt
gattttgaaaccggatccaatccatggcccatattcagattacagaagaaattcaactta
ccaggaaaatcagcccctctaagttcggaattttatactggatggctaacacactggggt
gaaagtatggcaacaacagatgccactagtactgctaaagcccttaaaacaattttgtgc
cacaatggttctgctgtactctatatggctcatggtgggaccaattttggattttataat
ggtgcaaatactggccaagatgaatttgattacaagccagaccttacttcttatgactat
gatgcaccaattaaggagcatggagatgtgcataattcaaaatacaaagcactaagaaga
gtaatacatgaatgtactgggtctcctcttcgtccacttccttctgacattgaaaaagca
aattatgggcttgtgaaattacagaaggttgcatctttgtttgacatcattgataatatc
agtgatcctttgaaaggtgctgtttcagagcatccgctgtctatggaacagataggccag
atgtttggatttctattgtacatgtcagaataccaagggaaactcccatcaagcatccta
tcaattccaaaggtacatgacagagctcaggtgttcctgtcttgctcaactgacagtgtc
agaaacctaagatatgctggtgtaattgaaagatggtctagtaaaacactagaaatacca
aatttaggatgttcatccaatacaagcctatatatactggtagaaaatatgggtcgtaca
aattatgggccatatatttttgaccggaagggaatactatctcctattcaattagatggc
atcactctctgtcactggaaaatgtatccacttacattcagttcactggacaaccttcca
aaactccaactagtcactcaaatgcctgatattagagctagtaaagagtccgttattcat
ggtcactcagaaaagaaattgcaggaatcattgttctattcgaatgaaagtgcttctgca
gaacctgaattttatgaaggccatttccatattgactctgagagtgagataaaggataca
tttatattatttcgtggttggaacaagggtgttgcttttgtgaacaacttcaacattgga
agattttggccgttttttttccaggcacgtggaccacagtgtgccctttatgttcccgcg
ccaatcctgagacctggagacaacattattgtaatctttgaactgcacggtccaaatcct
gagctcaccgtcaacttagtaacagatccagatttcacatgcggtccaaaacagtaa
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