Panicum hallii (Hall's panicgrass): 112884594
Help
Entry
112884594 CDS
T07366
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112884594
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112884594
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112884594
Enzymes [BR:
phai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112884594
Peptidases and inhibitors [BR:
phai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112884594
Ubiquitin system [BR:
phai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112884594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
112884594
NCBI-ProteinID:
XP_025805815
LinkDB
All DBs
Position
3:56704049..56716710
Genome browser
AA seq
1122 aa
AA seq
DB search
MTMMTPPPLEQQQEDEEMLVPHQELPVAGPEPAPQPMEVVAQTETANTAESQPAEDPQTS
RFTWTIESFSRLNTKKHYSDVFVVGGYKWRVLIFPKGNNVDHFSMYLDVADSGNLPYGWS
RYAQFSLAVVNQIHPKYTIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVVV
EAEVAVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIEQLFEGHHINYIECINVDYKSSRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAEQYGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPL
QLDLDRDDGKYLSPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDE
KDIAEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKIARDEDLNDQIGKNIYFDLVDHEKV
RSFRIQKQLPFTSFKEEVAKEYGIPLQFQRFWLWAKRQNHTYRPNRPLTPHEEAQSVGQL
REVSNKAHNAELKLFLEVELGPELCPIRPPEKSKEDILLFFKLYNAEKEELRFVGRLFVK
ALGKPSEILTKLNEMAGFSPSEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICF
QKAPVPDGDTQVRYPDVPSFLEYVHNRQVVHFRCLDKPKDDDFSLELSKLHTYDDVVERV
AHQLGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPL
PELQCLKTLKVAFHHATKDEVVVHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVF
YHKIYKIFPPHEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQN
FGDPFLMVVREGDTAAEVMERIQRKLRVPDEEFSKWKLAFISMNRPEYLQDTDVVSARFQ
RRDVYGAWEQYLGLEHTDTTSKRSYTANQNRHTYEKPVKIYN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacgccgccccctctcgagcagcagcaagaggacgaggagatgcttgtg
ccgcaccaggagctccccgtcgcgggccccgagcccgccccgcagcccatggaagtcgtt
gcgcagacggagaccgccaacaccgcggagagccagccggcagaggacccgcagacgtcg
cgcttcacctggacgattgagagcttcagccggctcaacactaagaagcactactccgac
gtgtttgtcgtcggagggtacaaatggcgtgtgctgattttccccaaggggaacaatgtg
gatcacttctcaatgtatttggatgtcgcggattcggggaacctcccatatgggtggagc
cggtatgctcagttcagcttggctgttgtgaaccagatccatcccaagtatacgatacgg
aaagatacccagcaccaatttaatgcacgtgagagcgactggggtttcacatcatttatg
cctttgagtgacctgtatgacccaagcaggggctatcttgtgaatgacactgttgttgta
gaagctgaggttgctgtccgaagaatggttgattattggacttacgactcgaaaaaggag
acaggttatgtaggtctcaagaatcaaggtgctacctgttatatgaactctctcctgcaa
acgttgtaccatataccatactttaggaaggctgtatatcatatgccaacaactgagaat
gacatgccatctgggagtattcctctagccttgcagagccttttttacaagctccagtat
agtgataacagtgtagcgacgaaagagttgaccaaatcctttggatgggatacttatgat
tctttcatgcagcatgatgtgcaagagctcaacagagttctttgcgagaaacttgaagat
aagatgaagggaactgttgtggagggaacaattgaacaattatttgaaggccaccacatt
aattacattgagtgcattaatgtggactacaaatctagcagaaaagaatcattttatgat
ttacagcttgatgtgaaaggttgtcgtgatgtttatgcatcatttgataaatatgtggaa
gtggagcgtctagagggtgataacaaatatcatgctgagcaatatggcttacaggatgca
aagaaaggtgtgctcttccttgatttccctcctgttttgcaacttcaactgaagcgtttt
gaatatgattacatgcgagatacaatggttaagattaatgatcgttatgaattcccgctg
caacttgatcttgatagagacgatggaaaatatctctcaccagatgcagatcgaagtatt
agaaacctttatacgcttcacagtgttcttgttcatagtggaggagtacatggtggtcac
tattatgctttcattcggccgactctctcagatcagtggtacaaattcgatgatgagcgg
gtcacaaaagaagatactaaaaaggcacttgaagagcagtatgggggtgaggaagagttg
cctcaaataaatcctggtttcaataacacgccattcaaattcacaaagtattcaaatgcc
tacatgcttgtttatattcgtgagagtgacaaggagaaaattatgtgtaatgttgatgag
aaggatattgcggagcatttacggataaggttgaagaaagaacaagaagagaaagaacac
aagaaaaaggagaaggctgaagcacacctctacactatcataaagattgctcgagatgaa
gatttaaatgatcagattggtaagaatatatattttgacttggtggaccatgaaaaagtt
cgcagcttccgcattcagaagcagttgccttttacttcattcaaggaggaagttgcaaag
gaatatggcatccctctacagtttcagcgcttctggttgtgggctaagaggcagaaccat
acataccggccaaatcgtccgctaacaccccatgaggaagcacaatcagttgggcagctt
agggaagtctcaaataaggcacataatgctgagctgaagctgtttctggaagttgaactt
ggaccggagttatgtccaattcgtccaccagagaagagcaaagaagacatactacttttc
ttcaagctttataatgctgagaaggaagagcttcgttttgtcggtagacttttcgtgaag
gctcttggaaagccatccgaaatattgacaaaactaaatgaaatggctggattttctcca
agtgaagaaattgagctatatgaggaaattaagtttgagccaaatgtgatgtgtgaacat
attgacaagaaactaactttccgttcgagccagcttgaagatggagacatcatctgtttc
caaaaggctcctgttcctgatggtgatacccaagtgcgctatccagatgttccttcattc
ttggagtatgttcacaataggcaggttgtgcactttcggtgtctggacaaaccaaaggat
gatgatttttctttggaattgtcaaagcttcatacttatgatgatgttgttgagagagtt
gcgcatcaacttggcttggatgatccatcaaaaattcggcttacatctcacaattgttat
tctcaacaacctaaaccgcagcctatcagataccggggagtagaacatctactggacatg
cttgtccattataatcagacttctgatatcttgtattacgaggttctggacattccactg
ccagaattgcagtgtttaaaaacacttaaagttgcattccaccatgcaacaaaagatgag
gttgtagttcatagcataagacttccaaaaaatagcaccatcagcgatgtgattactgac
ttgaaaaccaaggttgaactatctaaccctgatgctgagctccgcttgcttgaagtattt
taccacaagatttacaagatctttccgcctcatgagaagatagagaacataaacgatcag
tactggacactaagggctgaggagatcccagaggaagagaagaatcttggcccacatgat
cgattgattcatgtttatcatttcatgaaagaccctaatcagaaccagcagatacagaat
ttcggagatccttttttgatggttgtccgtgaaggtgacactgctgccgaggtaatggag
cgcattcagagaaaacttagagttcctgatgaggaattctccaagtggaagcttgcattc
atatccatgaaccggccggaatacctccaggatactgacgttgtatcagcacgatttcag
aggagagatgtatacggtgcttgggaacaataccttggcttggagcacactgatacaaca
tcaaaaaggtcttacacagccaatcagaatcgtcacacctatgagaagcctgtgaaaatt
tataattga
DBGET
integrated database retrieval system
