Panicum hallii (Hall's panicgrass): 112885771
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Entry
112885771 CDS
T07366
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112885771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112885771
04147 Exosome [BR:
phai04147
]
112885771
04090 CD molecules [BR:
phai04090
]
112885771
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112885771
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112885771
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112885771
CD molecules [BR:
phai04090
]
Proteins
112885771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
RsgA_GTPase
Zeta_toxin
DUF87
AAA_15
AAA_23
AAA_5
SbcC_Walker_B
AAA_7
P-loop_TraG
DLIC
AAA_25
Motif
Other DBs
NCBI-GeneID:
112885771
NCBI-ProteinID:
XP_025807196
LinkDB
All DBs
Position
3:complement(12687977..12693816)
Genome browser
AA seq
1254 aa
AA seq
DB search
MPSRGAMEEEEEKGEVGLHRLFRFADGADAALMAAGAAGAVASGVAQPLMTLVFGEVVHA
FGSGSRRDVLHRVSGVCLKFLYLAVGSWFACFLQVACWMITGERQAARIRGLYLEAVLRQ
DIAFFDKEITTGQLVQRMSGDTILIQDAIGEKVGKFLQLTATFVGGFVVAFSKGWLLAAV
MLSSIPPIVIAGAAMSWTVSRLSSQGQAKYNQAGNVVEQTIGAIRTVASFNGENRAIALY
NKYIRNAYISAVQEWTATGLGFGFAMFILFCSYGLTAWFGAKLIIDKGYDGGQVVSVWMA
FMTGAMSLGEATPCVSAFASGRSAGYRMMQVIQRKPEIDPNGTDGVVLADIKGDIELSNV
YFSYPSRPDQLIFDGFSLHVLCGKTMAIVGESGSGKSTVINLVERFYDPQAGEVLIDGVN
IKSLRLGWLRGKIGLVSQEPLLFATSIRENITYGKEDATDEEIMAATKLANAANFIDKLP
NGLDTMVGEHGAQLSGGQKQRIAITRAILKNPKILLLDEATSALDMESERAVQEALNRTM
QGKTTIIVAHRLSTIKDADTISVVHHGKVVEQGTHTELLRNPTGAYSQLIQLQDITGEPD
ASDVDYQRSTSAVRSAYLKRSISGGASFGSTSMHLVTTASMIVPESTHIELLSKVSDEGE
ECRKVPLSRLISLNKPEMPVLLLGTLAVVVSGVIFPMLGVLISSSIKSFYEPPHQLQKDS
RFWTLMYVASGVASFISLPVEYFLFGVAGGKLVERIRSLSFESIVHQEISWFDKPSNASG
TIGARLSVDASNIRRLVGDSLALMVRSTVTVLAGFIIAIVANWRLALVATVVLPLGGLQG
FLQIRFLEGFSADAKAMYEEATQVANDAVSGIRTVASFCAEHKVMKTYYGKCKDPVRQGI
RQGIVSGLGFGVLFFVLYSTYALCFYVGAKFMVDGKATFTEVFRVFFALLMATIGVSQTS
ALGSDSAKAKESASSIFALIDRKSKIDPNSDNGMVLVDVAGELELRHVCFSYPSRREMQI
FRDLNLRIPSGKTVALVGESGCGKSTIMALLERFYDPDSGMITLDGVDIKGLNVSWLRRQ
MGLVSQEPVLFSDTIRANIAYGKQGDATEEEIVAAAKAANAHQFISALPQGYDTSAGERG
AQLSGGQKQRVAIARAVLRDSRILLLDEATSALDAESERAVREALDRAAAGRTTLVVAHR
LSTIRGADAIAVLRDGGVVAQGTHEQLMASRDGAYASLVELRMRSERAGVSSSA
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgcgaggcgccatggaggaggaggaggagaagggggaggtcgggctgcaccgg
ctgttccggttcgcggacggcgcggacgcggcgctcatggccgcaggggccgccggcgcc
gtcgccagcggcgtggcgcagccgctcatgacgctcgtcttcggcgaggtcgtccacgcc
ttcggctccgggtcccgccgcgacgtcctccaccgcgtctccggggtgtgcctgaagttc
ttgtatttggccgtcgggtcatggtttgcttgcttcctccaggttgcatgctggatgata
actggagaaagacaagcagctcgtatacgaggtctctatctcgaagctgtattgaggcaa
gacattgcatttttcgacaaggagataaccactggacaattggttcagaggatgtctggt
gatacaatacttatccaggatgcaataggtgaaaaggtcgggaagtttttgcaacttact
gccacatttgttggagggtttgtagttgctttctctaaaggatggcttttagcagctgta
atgctgtcaagtatccctcctatagtaattgctggagcagctatgtcatggactgtatcg
agactatcaagccagggtcaagctaagtacaatcaagcaggaaatgttgttgaacagaca
atcggagcaatcagaacagtggcttccttcaatggtgagaatcgggccattgcactatac
aataaatatattaggaatgcatatatatctgctgtacaagaatggacagctactggcctg
ggctttggttttgctatgtttatcctgttctgcagctatggtctaacagcatggtttggg
gcaaaattgattattgataaaggatatgacggagggcaggttgtaagtgtctggatggca
ttcatgactggtgcaatgtcactaggtgaggcaactccatgtgtgtctgcttttgcttcc
ggacggtctgctgggtacagaatgatgcaagtaattcaaaggaagccagaaattgatccc
aatggaacagatggggttgtgctagcagacatcaagggtgatatagagctcagtaatgta
tacttttcctacccatctagacctgaccaactgatatttgatggcttctctttgcacgtc
ttgtgcggaaaaacaatggctatagtgggtgagagtggcagcgggaagtcaacagtgatt
aatcttgtggagagattctatgaccctcaggctggtgaagtgttgatagatggtgttaac
ataaagagcctgagacttggatggctaaggggaaaaatcggtcttgtcagtcaagagcca
ctgttgtttgccactagtatccgggagaacattacctatgggaaagaagatgcaacagat
gaagagataatggctgcgacaaagctcgctaatgcagcaaatttcattgacaagttaccc
aatggcctagacacaatggttggcgaacatggggcacaactgtctggaggacaaaaacaa
agaattgcaatcacgagagccatactaaaaaatcccaaaatcttgctgcttgatgaagcg
acaagtgcactagatatggagtctgagcgagcggttcaggaggcccttaatagaaccatg
caaggcaagaccacaatcatagttgcccatcggctgagcactataaaagacgctgacact
atatcagttgtacatcatggaaaagttgttgaacaaggcacgcacactgaactactgagg
aaccccactggtgcatactcccagcttatccagctgcaggatataactggagaaccagat
gcatctgatgtagattatcaaaggtctacttcagctgtcagaagtgcatatctcaagaga
tcaataagtggaggtgcttcttttgggagtaccagcatgcatttggtcacgactgccagc
atgattgttccggagagcacacatattgaactactgtctaaggtatcagacgaaggtgaa
gaatgcaggaaggtgcccctctcccgtcttatttctctgaataaacctgagatgccagtc
cttctgttaggtacattggctgttgtcgtatcaggtgttatctttccaatgctcggtgtg
ctgatctccagttccatcaaatcattctatgagccacctcatcaactccagaaagattca
cggttctggacattgatgtatgtagcatcaggagttgcttcatttatttctctgccagtg
gaatatttcctttttggagtggctggtgggaaattggttgagcgcattcgttctttatcc
tttgaaagcattgttcatcaagagatcagctggtttgacaagccctcgaatgctagtgga
accattggtgcaaggctgtctgtcgatgcctcaaatatacgacgtcttgtaggcgattca
ttggcattgatggttcgaagcactgttaccgttcttgctggatttattattgcaatagtt
gcaaattggaggcttgcccttgttgccactgtagtgcttcctttggggggtctccaggga
tttcttcagataaggtttttggagggattcagtgcagacgccaaggcaatgtatgaagaa
gcaactcaagtggcaaatgatgctgtcagcggtattcgaactgttgcctctttctgtgct
gagcataaggtgatgaagacttactatggaaaatgcaaagatccagtgcgacaggggatc
cgtcaaggcattgtcagtggcttgggtttcggtgtattgttcttcgtcctgtactctaca
tatgccctttgtttctacgtcggagcaaagtttatggttgatggcaaagccacattcact
gaagtattcagagtgttctttgctctgctcatggcaaccataggcgtttcacagacaagc
gcgctaggttcagattctgccaaggccaaggaatcagcgtcatcaatatttgcacttatt
gatcgtaaatcgaagatcgatccaaacagcgacaacggcatggtcttggttgacgttgct
ggtgaactcgaactccgtcatgtctgtttctcatatccatcccgccgtgaaatgcaaata
ttcagagatctgaacttgaggataccatccgggaagacggttgcccttgtcggggagagc
ggctgtggcaaatccaccatcatggctctcctggagagattttacgaccctgattccggc
atgatcacgttggacggcgtggacatcaagggcctcaatgtcagctggctgcggcggcag
atgggtctggtgagccaagagcccgtcctgttcagcgataccattcgcgccaacatcgcc
tacgggaagcaaggcgatgcgacggaggaggagatcgtcgccgccgcgaaggccgcgaac
gcgcaccagttcatatcggcgctgccccagggctacgacacctccgccggcgagaggggc
gcccagctgtccggcgggcagaagcagcgcgtggcgatcgcgagggccgtgctccgggac
tcgaggatcctgctgctggacgaggcgacgagcgcgctggacgcggaatcggagcgcgcc
gtgcgggaggcgctggaccgggcagcggccggcaggacgaccctcgtggtggcgcaccgg
ctgtcgacgatcaggggcgccgacgcgatcgccgtgctgagggacggcggggtcgtcgcc
cagggcacgcacgagcagctgatggcgtccagggacggcgcgtacgcgtcgctggtggag
ctccgcatgagatcggagcgcgccggagtctcctcgtcagcatga
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