Panicum hallii (Hall's panicgrass): 112885774
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Entry
112885774 CDS
T07366
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112885774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112885774
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
112885774
Prokaryotic type
Archaeal type
TFB
112885774
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_N
Ribosomal_S27e
HTH_Tnp_ISL3
Vps52_CC
Motif
Other DBs
NCBI-GeneID:
112885774
NCBI-ProteinID:
XP_025807199
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All DBs
Position
3:12696707..12697988
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AA seq
309 aa
AA seq
DB search
MAGELLHCPDCHRATEVVLDHATGDTVCTECALVLEAHYIDEGSEWRSFADDGGGEDRDP
SRVGGPNDPFLSNAPLVTRITYSGPQKVQAVGGNALPRMRVNVGGADHEQSLVEAFRAIA
DMADRLGLVATIRDGAKDVYKKLDEAKACPRGKKRDVFYAACLYIACRNDGKPRTYKELA
TVTRAGASAKKEIGRMTTLIKKVLGEEAGQQVLDIGVVRAADYLRRFCSRLGMGNQEMRA
AQEAARRLEAGLDVRRNPESIAAAISYMVVQRAAATKTVKDVSMATGVAEATIKEAHKDL
TPHAEMLFA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgagctgctccactgcccggactgccaccgcgccacggaggtggtgctggac
cacgccaccggcgacaccgtgtgcaccgagtgcgcgctcgtcctcgaggcgcactacatc
gacgagggctccgagtggcgcagcttcgccgacgacggcggcggcgaggaccgcgacccc
agccgcgtcggcggccccaacgaccccttcctctccaacgccccgctcgtcacccgcatc
acctactccggcccgcagaaggtgcaggccgtgggcgggaacgcgctgccgaggatgcgg
gtcaatgtcggcggggcggaccacgagcagtcgctggtcgaggcgttccgcgccatcgcc
gacatggccgaccgcctcggcctcgtcgccaccatcagggatggcgccaaggatgtgtac
aagaaactggacgaggccaaggcgtgccccaggggaaagaagcgggacgtgttctacgcc
gcctgcctctacatcgcgtgccgcaacgacggtaagccgcggacgtacaaggagctcgcc
acggtgacgcgcgccggcgcctctgccaagaaggagatcggccggatgaccacgctcatc
aagaaggtcctcggggaggaggctgggcagcaggttcttgacatcggcgtcgtgcgcgcc
gccgactacctgcgccgcttctgctcccggctcgggatgggcaaccaggagatgcgcgcc
gcgcaggaggcggcgcggaggctggaggccggcctcgacgtgcggcgcaaccccgagtcc
atcgccgccgccatcagctacatggtcgtgcagcgcgccgccgccaccaagaccgtcaag
gacgtgtccatggccaccggcgtcgccgaggccaccatcaaggaggcgcacaaggacctc
actccgcacgctgagatgctcttcgcctaa
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integrated database retrieval system
