Panicum hallii (Hall's panicgrass): 112892172
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Entry
112892172 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112892172 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phai03021
]
112892172
Transcription machinery [BR:
phai03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
112892172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
112892172
NCBI-ProteinID:
XP_025815071
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All DBs
Position
5:5109157..5120176
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AA seq
1483 aa
AA seq
DB search
MAAPPEATEAPPPPEDREGTAKDGVEVCLFDESADGFSRTVRAISELADLEPEPDFPDAE
VERFASSITFLREWRHFSYEPKDISFNTGIESAPSRDGMHSIILPQFSAATVPQVTQQED
RRDNTVSFDSILFAGGNVWALDWCPRLCDKPGSSINCEYLAVSAHPPGSSYHKIGMPLTG
RGIIQIWCLLAPFEDAHSRRPLDACNSISRRGRPRKIPDGTNSVGCSSNPPKPRGRPRKR
PYNDQLEPVPKRPRGRPRKYPLPVAKLEDSSQNSGCQAIVLFDPLATSTGIPDDLPLAYV
MPTTKSEKSTPKIGRGRPRKNPSDKLADSSAAVSKEDVRTEPSPTSAICAKPKRPRGRPR
KYPVPINDKSVSGADFDLGQETTFQPVSFSGSLDHTVCKEFNAIPRKKPSDKLIGSSGAV
SKEDACIEPSPTTSICAKPKRPRGRPRKHPVPINNTSVSGAVVDLGQEATCQPVSFSCSL
DHTVCTEFNANLSIVAVDAALPVVHKLTSSADTIVKENACIESPTTSTRKQPKRTRVRPR
KYSDTDIELGKDTIGWSVSSACSLDHTACTESNSNLSIVAVDAASLFTSSSTAISEKSKG
QRSRAQNKKKTISYELCSPVVSGVEPWSMGSIETVPNGPMASVENTLISAQNMVSVTSDL
CSANMLNSDDNVHKGALSGDLVQPIHISPKSRQSSGRRGRGRPKRNPLSVGTSSLVASGA
SSTKTTSVLTSSDNLTSLDKSDGEFIASNLGSIGSSGCSIEKSSVRLGVVSSDAASPRHG
LCNANCKEESSTKRGSGSRKKPVSTEHSHFTDFNGKEQKMQTNLKSSDPVVLVENCMKGP
CPRKGGGQPQRIPASNESNGTSVRGETHTMERFSTSVTTASPRNDDMADEAGLIQSNNGI
VGCEGMKVNASSTSNVTSHCNGNAQANQAAPSFKNSDRVIDEVEATELIPLKEPREDDNM
FSCAENSNSSPVPKDIALPRVVLCLAHNGKVAWDIKWKPPLLSQPEQKSRLGFLAVLLGN
GSLEVWEVPSPCMIQKLYSPSKVEGSDPRFLKLQPVFRSVKVKCGNRQSIPLTVDWSPSP
PHDMILAGCHDGTVALWNFSTNLSSQDSKPFMCITAESVPIRALSWAPYISEENINTFVT
AGADGLKFWDLRDPYRPLWELTTAPRAVLSVQWLKDGRGIVISMEDGTLKFLSLPRIAND
VPATGRPFVGTKTQGVATYQLSEYLIWSVHASDTTGCAAYCGADGTAVCFQLTPRFWEKE
PGRNRVPYFLCGSLSEEGENIKIGSGLQMSPLPNVPVVNKKGTKPCQNIVQGLPASDVTG
PPACQLNTPTGNRDIVNPELGYDQDGGHCEEQGTGAVDTELADDQDDGHGEEQGAGAVNP
ELGDDQDNGHRKGQGAGAVNPELGDDQDGHSEEPGAGAIVLAGPTEQEDAGTLNSKGGES
PKDFEVLPPKSVALHRVRWNMNKGSERWLCYGGAAGIIRCQRI
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcctccggaggcgacggaggcgccgcccccgccggaagatagagaggggacc
gctaaggatggcgttgaggtgtgccttttcgacgagtcagcagatgggttctccagaacg
gtgcgtgccatctcggagctcgccgacttagagcccgaaccagacttccctgacgcggaa
gtcgagcggtttgcctcgtcaataacgttcctcagagaatggaggcacttctcttatgag
ccaaaagatataagtttcaatactggcattgagtcagctccgtcaagagatggcatgcac
agtataatcttaccacagttttcagctgcaactgttccccaggtcacacagcaggaagat
cggagggataatactgtcagctttgattctattttgtttgctgggggaaatgtctgggcc
ttggactggtgcccaaggttgtgcgacaagcctggctcttctataaactgtgagtatctt
gctgtttctgctcaccctcctggttcttcttaccataaaattggtatgcccttaacgggg
agaggtatcattcaaatttggtgtcttttagcaccatttgaagacgcacattctcgtcgg
ccactggatgcatgcaatagtattagtcgaagaggaaggcctagaaaaataccagatggg
actaattctgttggttgttcatccaacccaccaaagccaagggggaggccaagaaagaga
ccttataatgatcagctggaacctgttccaaaaagaccaaggggcagaccgagaaaatat
ccgctgccagttgctaaattggaagattcatcccaaaatagtggatgtcaggctatcgtt
ctttttgaccctcttgccacttcaacaggtattccagatgaccttccattggcttatgtc
atgccaaccacgaagtcagagaaatcaactccaaaaataggtagagggcgacctaggaaa
aatccaagtgacaaattggcagattcatcggccgctgtatcaaaagaagatgtgcgtaca
gaaccatctccaacctctgcaatctgtgcaaaaccaaagagaccacgcgggaggccccga
aagtatccggttccaatcaacgataaatctgtttcaggtgctgattttgatttaggacaa
gagacaacttttcagcctgtttcatttagcggcagcttggaccacactgtttgcaaagag
tttaatgccatacctaggaaaaaacctagtgacaaactgataggttcatctggcgctgta
tcaaaagaagatgcgtgtatagagccatctccaacaacttcaatctgtgcaaaaccaaag
agaccacgcgggaggccacgaaagcatccggttccaatcaacaatacatctgtttcgggc
gctgttgttgatttagggcaagaggcaacttgtcagcctgtttcatttagctgcagtttg
gaccacactgtttgcacagagttcaatgctaatttaagtatcgttgcagttgatgcagca
ttgccagttgttcacaaactgaccagttcggcagacactatagtaaaagaaaatgcatgc
atagaatctccaacaacttcaacccgtaagcaaccaaagaggacacgggtgaggcctcga
aaatattcagacactgatattgaattagggaaggatacgattggttggtctgtttcatct
gcatgcagtttggaccacacagcttgcacagagtccaactctaatttaagtattgttgcg
gttgatgcagcatcactatttacatcctcatctactgcaatttctgagaagtcaaaaggt
cagaggagtagagcacaaaataagaagaaaacaatttcttatgaactatgttccccagtg
gtttctggtgttgaaccatggagcatgggttccatagaaactgttccgaatggtccaatg
gcctctgttgaaaatactttgatatctgcacagaacatggtatcagtgacaagtgacctt
tgttctgctaacatgttaaactctgatgacaatgtacacaaaggtgctctttcaggtgat
ttggtacagcccatccacatttcacctaaatcaagacagtcaagtggtaggaggggaaga
ggaaggcctaaaaggaatccgctttctgttggaactagttctttagtggcttctggtgcc
agctccacaaagacgacttctgtactgactagttcagacaatctcacatctttggataag
agtgatggcgaatttatagcaagtaatcttggttcaattggttcaagtgggtgtagtatt
gagaaatccagtgttcgcttgggtgttgtatcgtctgatgctgcatcaccaagacatggc
ttatgcaatgcaaattgtaaggaagaatcaagtaccaaaagaggaagtggatccagaaag
aaacctgtttcaactgagcacagtcattttacagattttaatggcaaagagcaaaaaatg
cagacaaatctaaagtcaagtgatcctgtggtcttggttgaaaattgtatgaaaggaccg
tgccctaggaaaggtgggggccaacctcaaaggatacctgcttcaaatgagagtaatggc
acatctgttcgtggtgaaacacacacaatggagagattttccacatctgtgactactgca
tcacctagaaatgacgacatggctgatgaggctggtttgatccagtctaacaatggaatt
gttggttgtgaaggcatgaaagtaaatgcaagcagtacctccaatgttacttctcattgt
aatggaaatgcacaagcaaatcaagctgcacccagtttcaagaacagtgatagggttatt
gatgaagtggaagccacagaactcataccactcaaagaaccaagggaagatgacaatatg
tttagttgtgcagaaaactcaaactcttctccagtcccaaaagacattgctctaccaagg
gttgtcttgtgtttagctcacaacggcaaagttgcttgggatatcaaatggaagcctcct
ttactaagtcagcctgaacaaaaatcacgcctgggtttccttgcggtattgttggggaat
ggctcccttgaagtgtgggaagttccatcaccatgcatgatccagaaattatattccccc
tctaaggtggagggttctgaccctcgttttctaaagcttcaacctgtatttaggtctgtc
aaagtgaagtgtgggaacagacaaagcattcccttgacagttgattggtcgccttctcca
ccgcatgatatgatattggcgggttgtcatgatggaacggttgctttatggaacttctca
acaaacctgtcatcacaagattcaaaaccttttatgtgtatcactgctgaatctgttccc
attagagctctttcttgggcaccttatataagtgaggagaacataaatacctttgttact
gctggagctgatggtctaaagttctgggatttaagagatccgtaccgtcctctttgggag
ctaactactgctccaagggctgtattaagtgttcagtggttaaaggatggaagggggatt
gtcatctcaatggaagatggtacattgaaatttctgagcttgccccggattgcaaatgat
gttccagccactggaaggccgtttgtcggaacaaaaactcagggtgttgcaacttatcag
ttgtcagaatatttgatttggagtgtccatgcctcagacactacaggttgtgctgcttac
tgtggggcagatggtactgcagtgtgcttccagcttactccaaggttctgggagaaggaa
cctgggcggaaccgtgttccttatttcctttgtggatcattatcagaggagggagaaaat
attaagattggcagcgggctgcaaatgtctccattaccaaatgttcccgtggtgaacaaa
aagggtacaaaaccgtgccaaaatatagttcagggcctccctgcaagcgatgtcactggc
ccgccagcatgccagcttaacaccccgacaggaaacagggacattgtaaatccagaactt
ggctatgatcaagatggtggacattgcgaagaacaaggaacaggtgctgtagatacagaa
cttgctgatgatcaagatgatggacacggtgaagaacaaggagcaggtgctgtaaatcca
gaacttggtgatgatcaagataatggacacagaaaaggacaaggagcaggtgctgtaaat
ccagaacttggcgatgatcaagatggacacagcgaagaaccaggagcaggtgcaatagtt
ttggctggtcctacagagcaagaggatgctggcacgttgaacagcaagggtggtgaatcc
cctaaagactttgaggtcttgcctcccaaatctgtcgcattgcatcgagtgcgatggaac
atgaacaaaggtagcgaaagatggctgtgctacggaggtgctgcaggcatcattcggtgt
cagaggatctaa
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