Panicum hallii (Hall's panicgrass): 112892843
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Entry
112892843 CDS
T07366
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phai01002
]
112892843
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phai04121
]
112892843
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112892843
Enzymes [BR:
phai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112892843
Peptidases and inhibitors [BR:
phai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112892843
Ubiquitin system [BR:
phai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112892843
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112892843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-UBP_var
zf-UBP
UCH
Motif
Other DBs
NCBI-GeneID:
112892843
NCBI-ProteinID:
XP_025815737
LinkDB
All DBs
Position
5:56329217..56334714
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AA seq
508 aa
AA seq
DB search
MDLLRSHLHKVRIPEPGNRIHKDECCVSFDTPRSEGGLYVDMSSFLGFGREHVEWNFEKT
GNPVYLHIVRRQKPEPDEADRPLKKPTLLAIGVEGGFGDQEPEYDNTFEIVILPDFISLP
FPSVDLPEKVRLAVDKVILAESADRKQQLAAWVADKKKISEYAMDLQQLENGVIVPPTGW
KCSKCDKTENLWLNLTDGMILCGRKLWDGSGGNNHAIEHYERTKYPLAVKLGTITADLEA
AGLKQKKIQESGKDAELLFGPGYTGLANLGNRYFEKQSLKAAFATAPTDPTMDLNMQMTK
LDMFALCIDCFLVASIVRVMQDQFTLLLDYRPTYWSAFAFDGRQLGQEGIRPGMFKSVIA
ANHSEFSSMRQQDALDFFLHLLDRVEQANPGNHELNPCSGFKFIIEERVQCPSGKVSYNK
RSDYILSLSIPLHEATNKEQLEAFREKKAAMDLDGKEVSNEEIVRPRVPLEACLASFSGP
EEIPDFYSTALNSKTTATKYAHFELYNF
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccgctcgcacctccacaaggtccgcatcccggagcccggcaaccgcatc
cacaaggacgagtgctgcgtctccttcgacaccccgaggtcggaggggggcctgtacgtg
gacatgagctcgttcctgggtttcgggagggagcatgtggagtggaacttcgagaagacc
gggaaccccgtgtacctccacatcgtgcggcgccagaagccggagccggacgaggcggat
cgccctcttaagaagcccaccctccttgcgataggcgtggaaggaggctttggtgatcaa
gaacctgaatatgacaatacttttgaaatcgtcattttacctgattttatctctctacca
ttcccctcagttgacttgccagagaaggttaggcttgcagttgataaggttatccttgct
gaaagtgctgacagaaaacaacaactagctgcttgggtcgctgacaagaagaaaattagt
gaatatgctatggatctgcagcagctagaaaatggtgttattgtgcctccaactggatgg
aagtgcagcaaatgcgataaaactgagaacctctggttgaatttaactgatggtatgatc
ctttgcgggaggaagctttgggatggaagtggtgggaataatcatgcaattgaacactac
gaacggaccaaataccctcttgcagtaaagcttggaacaattactgctgatttggaagca
gcaggattaaaacaaaaaaaaatacaagaaagtggaaaagatgctgaacttctatttgga
cctggttatactggtcttgcgaacctagggaatagatactttgagaagcagagtttgaaa
gctgcatttgcaactgcacctactgatccaacaatggacctaaacatgcagatgacaaaa
ttagacatgtttgctctctgcatagactgctttcttgttgcatccatagtaagggttatg
caagaccagttcacacttcttcttgattatcgaccaacgtactggtctgcttttgcattt
gatggacggcaactggggcaggaagggatacgtcctggtatgtttaagtcagttattgct
gcgaaccattctgaattttcaagtatgaggcaacaggatgcccttgatttcttccttcac
cttcttgaccgagttgagcaggcaaaccctgggaaccatgagttaaatccttgttcaggt
ttcaagttcattattgaggagagggtccagtgcccttctgggaaagtttcttacaacaag
cggtcggactacattctttctttgagcataccactgcatgaggcaactaataaagagcag
ctagaagcttttcgtgagaagaaagctgcaatggacttggatgggaaagaagtgtctaat
gaggaaattgtgaggcctcgagtcccattggaggcatgcttagcaagtttttcaggccca
gaggaaattcctgatttttacagcactgctttaaattcaaagacgactgccaccaagtat
gcacattttgaactctacaatttttaa
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