Panicum hallii (Hall's panicgrass): 112893763
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Entry
112893763 CDS
T07366
Name
(RefSeq) serine/arginine-rich splicing factor SR45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03013
Nucleocytoplasmic transport
phai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112893763
03015 mRNA surveillance pathway
112893763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112893763
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112893763
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
DnaX_C
Motif
Other DBs
NCBI-GeneID:
112893763
NCBI-ProteinID:
XP_025817022
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All DBs
Position
5:complement(829383..833635)
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AA seq
427 aa
AA seq
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MAKPRRGRSASRSTSGSSSRSPSRSVSSGSVSSRSRSRSRSFSSSSSQSRSRSPPPAKRS
SPGARKGRSPSPPPRRGSPSKKVRSPSPPPKKASPPRKASPPAESAVLCIDHLSRNVNEA
HLKEIFGNFGEVVNVELSMDRLVNLPRGYGYVEFKKRADAEKALLYMDGGQIDGNVVKLR
FTLQPRQRAASPTKVPPPPKRDAPPNDKGASSAEKDAQQRPRESSPRKKPASPPRKRSPP
NRRVESPRRPPDPSPRRRPDSPPIRRRPDPSPVRRGDTPPRRRPLSPLRRRSPSPPRRHR
SPMRPSPRRGRGSPSPRRRSPGPPRRRSPPPRRLRSPPRRPPPPRRYSRSPPPRRPLRSR
SRSISPRRGRGPPLRRGRSDSSYSRSPSPPRKGPRRVSRSRSPRRPPRGRSISSDSRSSS
SPSPRRR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcggcgcggccgctccgcctcgcgctccacctcgggctcctcctcccgc
tcgccgtcccgctccgtctcctccggctccgtctcgtcccgctcccggtcgcgctcccgc
tccttctcgtcgtcctcctcccagtcccgtagccgctcccctcccccagctaagcgcagc
tcaccgggagcacggaaaggtcgatcaccttcaccacctcctagaagaggttcaccctcg
aagaaagtccgttcgccatcaccaccgcctaaaaaggcttcaccccctaggaaagcatct
cctcctgctgagtctgctgttctctgcattgatcatctatcaaggaatgttaatgaggct
cacttgaaagagatttttggaaactttggcgaggtggtgaatgtggagctatcaatggac
cgattggtcaatcttcctcgtgggtatggatatgtcgaattcaagaagagagctgatgct
gagaaagctcttctttacatggatggtggtcaaattgatggaaatgttgttaagttgaga
ttcactcttcaaccacgccaaagggctgcatcacctacaaaggttcctccccctccaaaa
agagatgctcctccaaatgacaaaggtgctagtagtgctgaaaaggatgcccagcagcgt
cctagggaatcatctccacgaaagaagcctgcttcacctccgcggaagcgatctcctcca
aatcgaagggtggagtcacctaggcgtccacctgacccatcacctaggcgtcgtcctgat
tctccaccaattcgtcgccgacctgatccttctcctgtcaggcgtggtgacacacctcct
cgccggagaccactatctccacttaggaggcggtctccttctccaccacgaaggcatagg
tcaccgatgcggccttcacctaggaggggtcgtggtagcccatcaccacgcagacgctcc
cctgggcctcctaggaggcgatcaccacctccaaggcggttgaggagcccaccaagaagg
ccaccgcctccacgtcgttatagtcgttctcctcctcctcgccgtccccttcgatcccgc
tctagatcgatttctccaagaaggggtcgaggacctccattgaggcgtggaaggtcagac
tcatcatattctcgatcacctagtccaccaagaaaggggccaagaagggtatcaaggagt
cgcagccctagaagacctcctagaggaagaagcatctctagtgacagccgaagcagcagc
tcaccttcccctagacgcaggtag
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