Panicum hallii (Hall's panicgrass): 112893871
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Entry
112893871 CDS
T07366
Name
(RefSeq) uncharacterized protein LOC112893871 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
phai
Panicum hallii (Hall's panicgrass)
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phai03019
]
112893871
Messenger RNA biogenesis [BR:
phai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112893871
Surveillance factors
Other surveillance factors
112893871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
112893871
NCBI-ProteinID:
XP_025817176
LinkDB
All DBs
Position
5:2224838..2231798
Genome browser
AA seq
1535 aa
AA seq
DB search
MAERKLDRPAALGKDGLSLGIEEDRAAAAAMGFVDDSKDQLHLDNSIPLSPQWLYAKPAD
GKISLPHGSSFEPAEREVRMLEGTVDRKERRRNVFDADSGLRWLEEERETSLLGRRERKK
EVERDVDNRKIDRRSDNVSARDNTDSRAPPTSDRWNDGSTRLGNEGRRDGKWSTRWGPDD
KEKDSRSEKKVDVEKDETHAEKQTFTGRLLSESDSRDKWRPRHRQESHSVVTATYRAAPG
FGSEKGRVKDSNVGFAPGRGRGNPNSVTSFSRPSSAGPIGAPAVHGKSAKSAVCFRYPRG
KLLDIYRQKNMMSSFDDAKLEEIPSITLSTSAKPLAFVAPDTVEEALLEDIRKGKVISSE
GSNATGNKKERAKELEEPASVIDEDKDKVALAFGGLGQEGSATLISEKDAFYDNRTLSGG
VGTSPSKKSMEENAVSNQYRIAGIQDGLKTDEAKTSTDLDLSPNLPDDSNTLFDVPPFEH
HSEPPMPYQNSDIDIKAGGHASYPEELTLYYLDPQGGVQGPFLGADIISWYEDGYFGLEL
PVRLSQAPDDVPFRPLVEVMPHLGQKPQSRPPALCDESAESLDSAQSKFEAAIPTSASSG
KSDQASKWDSESNAVDPKRGDHDASLPSRAGWLSSPETGKDTANISSRQQNIPESVTQDA
EEVLYTGRPNSSMGQSVRDLENDRADFKLAPRDPHSAVGEANLPQHDIPRESDLSPLGLL
WSELEGMHPKQPLSSNVLGVNERRNPKPTAPKDIPPVNMRHGQLSRMNEASSMRDEWPAN
FGRLDSMNDANIPGRIPQVEAEHHLNFEEQLLLQQIRREQLQQEQMMARNNLEFPGPFPG
QVFDSLHQHRQPMNQPLSDVEHLLRVQFELDQQQQRRQQLQQEQHQRQLQQQRQAQLLQQ
QQQQQQQQMILEQLLQQQLQGSNFGPTNMVDQVLLREHVLNELHQQPHHLQRQHDAAIEQ
LIQAKFGHGLHREHHNDMLDVLSRSNQRQMLPLEQQILLGLQQEQLQSQQLANALRQHSG
REEERHLSGVWPMDDAAQFIRPGTSPNQGHASRHGRFDLLENLQRSSSFEQHEPLERNLS
LHERLHRGGQGIHSLERSGSLPGGGPVPNPDVINALARHHGLGQLETHGDLYSLGQMPML
PSGVHPQQHRLQEQLSGSHLGRLERHWSDANGQMQNSLMESSRINQLQIEAEKQRRNVEM
NLSVDNPHAWAALMNKERNTEQDLSDMIHKKLALQSQQSLGFPDVPVPASFGRKDHFAQP
GVENPLRSPVDRLSFEESLAERSLFAKTGQSAQEGSANLDSLPNSIENSGKYNLRSSSGS
MLEQKHFLGIDDVQRDFSDVTGGRASANHLVGSVNELTRGKKQGSSANLVADDTNFSEDA
VNNWSDTGISKGSSHSLLKRSTNQHTATSQAVSTDLSTIRLKKAGLVSSDENKMESGITS
VAQAMEASVPSNKETGVYSMPSATNNPDASGPSFSEALKSKKPPLQYDTSESADGGPGGK
GAKKKTKKGKQIDPSLLGFKVHSNRIMMGEIVRDD
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaggaagctggatcgacccgccgcgctcgggaaagatgggctgtcgcttggg
atcgaggaggacagggccgccgccgccgccatggggttcgtcgacgattccaaagatcag
ctgcacctggataacagcattcctctgtctcctcagtggctctacgccaaaccggctgat
ggaaagatttctctgcctcatgggtcctcctttgaacctgctgaaagggaagtgaggatg
ttggaaggaactgttgataggaaagaaagaaggcggaatgtatttgatgctgacagtggt
cttcgttggcttgaagaggagagggaaacaagcttgcttgggaggagggagcgcaagaag
gaagtggagcgggatgttgataatcgtaaaattgatcgccgatctgacaatgtttctgca
agggataacactgattcacgtgcacctcctacatctgataggtggaatgatggttccacc
cgcttggggaatgagggtcgccgtgatggaaaatggtctacaagatggggacctgatgac
aaggagaaggactctaggtcagaaaagaaggttgacgtagaaaaggatgaaacacatgct
gaaaagcagacattcacaggaaggctgctgtctgagtctgattcccgtgataaatggaga
cctcgtcaccgtcaggaaagtcattctgtcgtgacggcaacataccgcgctgctccaggc
tttggatcagagaaagggcgtgtaaaggactcaaatgttggctttgcccctgggcgaggc
aggggaaacccaaactcagtcacatccttcagtcggccatcatctgcaggaccaattggt
gctccggctgtgcatgggaagtctgcaaaatctgctgtttgtttccgctacccaagaggg
aagcttctggatatttacaggcaaaaaaatatgatgtcatcctttgatgatgctaaactg
gaggaaattccttccatcacactctctacttctgctaaaccacttgcctttgttgcaccg
gatactgttgaagaggctcttctggaagatattagaaagggtaaagtcattagcagcgag
ggaagcaatgcaactggaaacaaaaaagagagggcaaaagagcttgaagaacctgcttct
gtcattgatgaagacaaagacaaggtcgctctagcatttggtgggttgggtcaggaagga
tctgcaactttaatctcggagaaggatgccttctatgacaaccggacgctttctggtggt
gttggtacatccccatcaaagaaatctatggaggaaaatgctgtcagtaatcaatacagg
attgctggcattcaggatggtttgaaaactgacgaagccaagacaagtactgatcttgat
cttagccctaacctacctgatgattcaaacactctgtttgatgtgccaccttttgagcat
cattcagaacccccaatgccgtaccaaaatagtgacattgatataaaagctggtggccat
gctagttacccagaggagctgacattgtattatctggatcctcaaggaggtgtgcagggt
ccatttctgggtgctgacataatctcctggtatgaagatggatactttggtttggagtta
cctgtgcgtttgtctcaggctccagatgatgttcctttccgcccactcgttgaagtcatg
ccacatcttggacagaagccgcaatctcgtccgcctgcactctgtgatgaaagtgctgaa
tctttggattctgctcaaagtaaatttgaagctgcaatccctacttctgcttcttctggg
aaaagtgaccaagcctccaaatgggattctgaaagcaatgcagttgatcctaaaagaggt
gatcatgatgcatcattaccttcgcgtgctggttggttatcttcacctgaaacaggaaag
gatacagcaaatattagtagtcgccagcagaacattcctgaatcggtgactcaggatgct
gaagaagtgctgtacactgggaggcctaatagcagcatgggtcaatctgtacgggatctt
gaaaatgaccgtgcagatttcaagttggcaccacgtgatcctcattctgcggtcggagaa
gctaatttgccgcagcatgatatcccaagagagagtgatctcagtcctcttggcttactt
tggtctgagctggaagggatgcatccaaagcaacctctctcatcaaatgtacttggtgta
aatgagcgtagaaatcccaagcctacagcgcccaaggatattccacctgtaaacatgaga
catgggcaacttagcaggatgaatgaagcttctagtatgcgtgatgaatggcctgcaaac
tttgggcggctggatagtatgaatgatgcaaatattccaggcagaatccctcaggttgag
gccgagcatcatttaaattttgaagagcaactgctgcttcaacagatccgaagggagcaa
ctgcagcaggagcaaatgatggcccgtaacaatttggagtttcctggtccgtttccaggc
caggtgtttgattctttgcaccaacaccggcagcctatgaatcaaccactttctgatgtg
gagcatctcttgagagtccagtttgaacttgaccagcagcagcaacgtcgccaacagctt
caacaagagcagcaccaaaggcagctgcagcagcaacggcaagcccagctcttgcaacag
cagcaacagcagcagcagcaacagatgattcttgagcaactgttgcagcaacagttgcag
ggttcaaattttggaccaacgaatatggttgatcaagtcttacttcgggagcatgtatta
aatgaactgcatcaacaacctcaccatttacaaaggcagcatgatgcggcgattgaacaa
ctaattcaagcaaaatttggccatgggcttcatagggagcatcataatgatatgttggat
gttctgtcacgttcaaaccagagacagatgcttcctttggagcagcaaattcttttaggc
cttcagcaggagcagcttcagtcacaacagctggctaatgctctgcggcaacattcaggc
agggaggaagaaaggcacttaagtggggtctggccaatggatgatgcagcacagtttatc
cgcccaggaaccagtccaaatcaaggtcatgcatctcggcatggtcgtttcgatctccta
gagaaccttcagagatcctcatcgtttgagcagcatgaacctcttgaacggaacttgtcc
ttgcacgagcgtttgcataggggaggccaaggtattcactcacttgagcggtctggttct
ttgcctggtggtggtcctgtaccaaacccagatgttataaatgccctagcacgccatcat
ggacttggtcagttggaaacgcatggtgatttatattctttaggccaaatgcctatgctt
ccttcaggagttcacccccagcaacataggcttcaggagcagctttctggttcacactta
ggaaggctggaaaggcactggtcggatgccaatgggcaaatgcaaaatagtctaatggaa
tcttcacgtatcaaccagttgcagattgaagcagagaagcagaggaggaatgtggaaatg
aatctttctgttgacaacccacatgcatgggcagcacttatgaacaaagagaggaacacg
gagcaagatttgagtgatatgattcataagaaacttgcccttcagtcgcaacaatctttg
ggcttccctgatgttccagtgccggcatcgtttgggcgtaaagatcactttgcacagcct
ggtgtggagaaccctttgagatccccagtggacaggttgtcttttgaggagtctcttgca
gaaaggtctctttttgcaaaaacagggcagtcagcgcaggagggatcagccaaccttgat
agtttacccaacagtattgagaacagtggaaaatataaccttagatcaagctctggatca
atgcttgagcagaagcattttcttggaattgatgatgttcaaagggacttttcagatgtt
acaggtggcagagcgtcagctaatcatttggttgggagtgtcaatgagttgaccagggga
aaaaagcagggttcaagtgcgaacttggttgcggatgatactaacttttctgaagatgct
gttaacaactggtctgatactggcatatcaaaagggagctctcactcgttactaaaacgc
tccacaaaccaacatacggctacatcccaggcagtttctacggatctatcaacaatcagg
ctgaagaaggcaggccttgtgtcctctgatgagaataagatggaatcaggtatcacctca
gtagcccaggctatggaagcctctgttcctagcaacaaagagacaggggtgtatagcatg
ccatcagccacgaacaatccagatgcctctggcccttcattcagcgaagcgctgaagtca
aagaaacctccgttgcagtatgatacctcagaatctgctgacggtggcccaggtggtaag
ggtgcgaagaagaaaacaaagaaaggaaagcagattgacccttctcttcttggcttcaag
gtccacagtaaccggatcatgatgggcgagattgttcgagatgattag
DBGET
integrated database retrieval system
