Panicum hallii (Hall's panicgrass): 112895829
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Entry
112895829 CDS
T07366
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112895829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phai02000
]
112895829
04147 Exosome [BR:
phai04147
]
112895829
04090 CD molecules [BR:
phai04090
]
112895829
Enzymes [BR:
phai01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112895829
Transporters [BR:
phai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112895829
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112895829
CD molecules [BR:
phai04090
]
Proteins
112895829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
AAA_21
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_30
AAA_15
SbcC_Walker_B
DUF87
AAA_25
DEAD
G-alpha
DUF815
Motif
Other DBs
NCBI-GeneID:
112895829
NCBI-ProteinID:
XP_025819608
LinkDB
All DBs
Position
5:50008092..50013910
Genome browser
AA seq
1275 aa
AA seq
DB search
MPESWRPAEASAAALPDAGTPGAPARSRGAGNGGKGGGPGASAATRVPFHKLFAFADSTD
VALMLLGALGAVANGAAMPFMTVLFGNLIDAFGGAMAIHDVVNRVSNVSLEFIYLAIASA
VASFVQVTCWMITGERQAARIRNLYLKTILRQEIAFFDKYTSTGEVVGRMSGDTVLIQDA
MGEKVGKFIQLVVTFFGGFIVAFAQGWLLTLVMMATIPPLVLAGAVMSNVVAKMASLGQA
AYAESSVVVEQTIGSIRTVASFTGEKRAVEKYNSSLKSAYKSGVREGLAAGLGMGTVMVL
LFCGYSLGIWYGAKLILEKGYTGAKVMNVIFAVLTGSLALGQASPSMKAFAGGQAAAYKM
FETINRTPEIDAYSTTGRKLEDIRGDIEFRDVYFSYPTRPDEQIFKGFSLTIPSGMTIAL
VGQSGSGKSTVISLIERFYDPQLGDVLIDGVNLKEFQLRWIRSKIGLVSQEPVLFAASIK
ENIAYGKDNATDQEIRAAAELANAAKFIDKMPQGFDTSVGEHGTQLSGGQKQRIAIARAI
LKDPRILLLDEATSALDAESERIVQEALDRVMTNRTTVIVAHRLSTVRNADTIAVIHQGT
LVEKGPHNELLRDPEGAYSQLIRLQEANRQDTRKGDSNARSGKQMSINKSASRRSSRDNS
SHHSFSVPFGMPLGIDIQDGSSNKLCDEMPQEVPLSRLASLNKPEIPVLILGSIASVISG
VIFPIFAILLSNVIKAFYEPPHLLRKDSQFWSSMFLVFGAVYFLSLPLSSYLFSVAGCRL
IKRIRLMTFEKVVNMEIEWFDHPENSSGAIGARLSADAAKVRGLVGDALQLVVQNSSTLV
AGLVIAFVSNWELSLIILALIPLIGLNGWIQMKFIQGFSADAKMMYEEASQVANDAVSSI
RTVASFSAEEKVMDLYKKKCEGPLRTGIRTGIISGIGFGVSFFLLFGVYAASFYAGARLV
EDRKTTFPKVFRVFLALAMAAIGVSQSSTLTSDSSKAKSAASSIFAIVDRKSRIDPSEDA
GVTVETLRGNIEFQHISFKYPTRPDVQIFRDLCLTIHAGKTVALVGESGSGKSTAISLLQ
RFYDPDVGHILLDGVDIQKFQLRWLRQQMGLVSQEPALFNDTIRANIAYGKDGQATESEI
IAAAELANAHKFISSALQGYDTMVGERGAQLSGGQKQRVAIARAIVKDPRILLLDEATSA
LDAESERVVQDALDRVMVNRTTVIVAHRLSTIQNADLIAVVRNGVIIEKGKHDALINIKD
GAYASLVALHSAASS
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgccggagtcctggagacccgccgaggcgagcgcggcggcgctgcccgacgcggggacc
cctggcgccccggcgcggagccggggcgcgggcaatggcggcaaggggggcggccccggc
gcgtcggcggcgacgcgggtgccgttccacaagctgttcgcgttcgccgactccacggac
gtggcgctgatgctgctgggcgcgctcggggccgtcgccaacggcgccgcgatgcccttc
atgaccgtgctcttcggcaacctcatcgacgccttcggcggcgcgatggccatccacgac
gtcgtcaaccgggtctccaacgtctcgctcgagttcatctacctcgccatcgcctccgcc
gtcgcctccttcgtccaggtcacgtgctggatgatcaccggcgagcggcaggcggcgcgg
atacggaacctgtacctcaagaccatcctgcgccaggagatcgccttcttcgacaagtac
accagcaccggcgaggtcgtcggcaggatgtccggcgacaccgtgctcatccaggacgcc
atgggcgagaaggtcggcaagttcatccagctcgtcgtcaccttcttcggcggcttcatc
gtcgccttcgcgcagggatggctgctcaccctggtcatgatggccaccatcccgccgctc
gtcctggcgggcgccgtcatgtccaacgtcgtcgccaagatggcgtccctgggtcaggcg
gcctacgcggagtcgtcggtggtggtggagcagaccatcggctccatcagaacggttgcg
tctttcaccggcgagaaacgggcggtggagaagtacaacagttccctgaagagtgcgtac
aagtccggcgtccgggagggcctcgccgcggggctcgggatgggcacggtcatggtgctc
ctcttctgcggctactcgctggggatttggtatggcgccaagctgattctggagaagggg
tacacaggagccaaggtcatgaatgtgatctttgcagtcctcaccggttctctagctcta
ggtcaggcatcgccaagcatgaaagcgtttgcaggtgggcaagcagctgcatacaaaatg
tttgagacgatcaacagaacaccggaaattgacgcttacagcaccacgggaaggaagttg
gaggacatccgaggggatatcgagtttagggatgtctatttctcctatccgacaaggcct
gatgaacaaatattcaagggtttctccctcactataccaagtggcatgacaattgctctt
gtaggccagagtgggagtggtaaatccacggtcatcagcctaattgaacggttctacgac
cctcagcttggcgatgttctgatagatggtgtgaatctcaaggagttccagttaaggtgg
atcagaagtaaaatcggccttgtcagccaggagccagtcctttttgctgccagcataaag
gagaacatagcttatggcaaagataatgcaacggatcaggaaattagagctgctgctgag
cttgccaacgctgccaaattcatagataaaatgcctcagggtttcgatacttcggttggt
gagcatgggacacagctttctggtggacagaagcaaagaattgccattgcaagggctatt
ctaaaagacccaagaatcctactattagatgaagctacaagcgctctggatgctgaatct
gaaaggattgtgcaggaagctcttgacagggtcatgacaaacaggacaactgtcatagtt
gcacaccgtctgagcactgttagaaatgctgataccattgctgtcattcatcaaggaaca
ctagttgaaaaaggaccacacaatgagcttctaagagatccagaaggagcttatagccag
ctgataaggctacaggaagcaaaccggcaggacactcggaagggcgattccaatgctcgt
tcaggcaaacaaatgtcaataaataaatcagctagcaggaggtcatcccgtgataacagt
agccaccattcattctcggtaccatttggtatgcctcttgggattgacattcaggatggt
tcatctaacaaactatgtgacgagatgccacaggaagtgcctctcagtcggcttgcatct
cttaacaagccagagatccccgtgcttatccttggttctattgcctcggttatcagtgga
gttatcttcccaatctttgcgatactcctgtcaaatgtgatcaaagcattctatgagcct
ccacatctactaaggaaggattcacagttctggtcttccatgttcttggtgtttggtgca
gtgtacttcttgtcactccctttgagctcgtaccttttctctgtagctgggtgtaggttg
attaaaaggatccgactgatgacatttgagaaggtggtaaatatggagattgaatggttt
gatcacccagaaaactcaagtggagcaattggtgcaaggctgtcagctgatgcagcgaaa
gttagaggacttgtgggagatgcgcttcaattggttgtgcaaaactcctcaacattagtt
gctggtttggtaattgcctttgtatcaaactgggaactatctctcatcatattagcttta
ataccacttattggcctaaatggatggatccagatgaagtttattcagggtttcagtgca
gatgccaagatgatgtatgaggaggcaagccaagtggctaatgatgcagtaagcagcata
agaacagtagcctcattttcagctgaagagaaggtcatggatttgtacaagaagaaatgc
gaaggccccctaagaacaggaatcaggacagggattataagtggaatcggttttggtgtt
tcctttttcttgctattcggggtatatgcagctagcttttatgctggtgctcggcttgtt
gaggacaggaagacaaccttccctaaagttttcagggtttttcttgctcttgcaatggca
gctattggagtgtcacaatcaagtacccttacatcggattcttccaaagcaaaatcagct
gcatcttctatatttgcaattgtagatcgaaagtcaaggatagacccaagtgaggatgca
ggagtgactgttgagacattgcgaggaaatatcgaattccagcatattagcttcaaatat
cctacaaggccagatgttcagattttccgggacctctgcttgacaattcatgctggaaag
actgttgcgcttgtcggagagagtggtagtggcaaatcgacagcaatttcattgcttcaa
agattctatgacccagatgtaggccatatactactagatggcgtggacatacagaagttt
cagctaaggtggctaaggcaacagatgggcctggtcagtcaagaacctgctttgtttaat
gacacgataagggcaaacattgcctatggaaaagatggacaagcaacagaatctgagatc
atagctgctgcagaattggcaaatgctcacaaatttatcagttcggcgctccaggggtac
gacacaatggttggagagcgtggagctcagttgtcaggagggcagaagcagcgtgtggca
atcgcccgcgcaatcgtcaaggaccctaggatcctgctgctggacgaagcgaccagcgca
ctggatgctgaatccgagcgggtcgtccaggatgcgctggacagggtgatggtgaaccgg
acaacggtgatcgtcgcgcaccgtctatcaacaatacaaaatgcagatttaatcgcagtt
gtaagaaatggggtgatcatcgagaagggaaagcacgatgccttgataaacatcaaggat
ggcgcgtatgcgtccctcgtcgcccttcactcggcagcctcttcatag
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integrated database retrieval system
