Panicum hallii (Hall's panicgrass): 112899362
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Entry
112899362 CDS
T07366
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112899362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phai04040
]
112899362
Ion channels [BR:
phai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112899362
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Tet_res_leader
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
112899362
NCBI-ProteinID:
XP_025823584
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Position
7:45443229..45449586
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AA seq
723 aa
AA seq
DB search
MFDSAQKAQYMDGHRERFIRLEESSPRSSVPSEVGGRSTLRFSMPGFGYGSFNALRSFLS
GVRKGSGRLKSLRQSLTSGAPKTAFAEDLKSYKTNIFDPQDKLLFQMNWVFFVSCLFAVA
VDPLFFFLPIINNSNCIGIDKKLAVTSTIIRTIIDFVYLIRVCLQFRTAYVAPSSRVFAT
GELVIDPMLIAKRYFKSYFAMDFVALLPLPQIVVWRYLHIPDGPDVLTTKTALVWVVLVQ
YIPRLLRIFPVTKDLKRTAGVFIETAWAGAAYYLLWFMLAGHNVGTLWYFLTIQREDSCW
HQYCDPNGGCNSSYLYCNNNRHDNHEYDKWLSSTQVFNLCNGTQPDPFNFGIYQQALVSG
ILGPGNFISKLCYCFWWGLQNLSTLGQGLSTSIYPGEVLFSIFICVLGLILFALLIGNMQ
SYLQSVAIRLEEMRVKKRDAEQWMHHRSLPPDIRQRVRRYERYRWLETRGVDEESLVQTL
PKDLRRDIKRHLCLGLVKRVPLFENMDERLLDAICERLRPALYTENEFILREGDPVDEMH
FILHGCLESVTTDGGRSGFFNKVQLKEGSFCGDELLTWALDPKSGANFPASSRTVKALTE
VEAFALCAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYYKRKMAEQ
RRKEEEAASRPSSSHPSLGATIYASRFAANAMRGVHRLRSKAVPAIVRLPKPPEPDFGVD
DAD
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagtgctcaaaaagctcaatacatggatgggcacagagagaggtttattagg
ctggaggagtcaagtcctaggtcatctgtaccttctgaagtgggaggcaggagtaccttg
aggttcagcatgcctgggtttggttatggttcatttaatgcactaagatctttcctgtca
ggggttcgaaagggctctggaagactgaagtcacttagacagtcacttacgtctggagct
cctaaaacagctttcgcggaagatcttaaatcatataagacaaatatatttgatccccag
gacaaacttcttttccaaatgaactgggttttcttcgtgtcttgtctatttgctgttgca
gtggatccactgttcttctttctacccatcatcaacaattcaaactgcattggcatagat
aaaaaattggcagtgacatcaacaataatacggacgattattgattttgtctaccttata
cgcgtgtgtcttcaattccgcactgcttatgttgccccatcttctcgagtgtttgcgact
ggtgagcttgtgattgatccaatgctaattgcaaagcggtactttaaaagttactttgca
atggactttgttgcattgctaccacttccacagattgttgtttggagatatctccacatt
ccagatggccccgatgtactgaccacaaaaactgcactggtctgggttgtcttggtgcag
tacattccaaggttgcttcgaatattccctgtgaccaaagatttgaaaaggacagctggt
gtttttattgaaactgcttgggctggtgctgcttattatcttctatggtttatgctggct
ggtcataatgtaggtactttgtggtactttttaaccatacaacgtgaagatagctgctgg
catcagtattgtgatcccaatggtggatgcaatagcagctacttgtattgcaataataat
cggcatgataaccacgaatacgataaatggcttagtagtacccaagtattcaacctgtgc
aatggtacccaacctgatcctttcaactttggcatttaccagcaagcactggtctctgga
atacttggtccaggaaattttatctcaaaattgtgttattgcttctggtggggattgcaa
aatctaagcacccttggtcaagggctttcaacaagcatataccctggagaagtgctattc
tctatttttatatgtgtgctcggactaatcctcttcgctcttctcattggtaacatgcag
tcttatctgcaatcagttgctatacgtctcgaagaaatgagagttaagaaacgtgatgct
gagcagtggatgcaccaccgttcactgccaccagatatcagacaaagagtgaggcgttat
gaacgatataggtggttggagaccagaggagtagatgaagaaagtttggttcaaacactt
ccgaaagatcttaggagggatatcaaacgacatctctgtttgggtctagttaaaagggta
cctttgttcgagaacatggatgaacgattgttggatgcaatatgcgagcgactaagaccc
gcactctacactgaaaatgaattcattctaagagaaggtgatccggtggatgagatgcat
tttattctacatggttgtttggagagcgtaaccactgatggtggacgaagtggattcttt
aacaaagtccagctaaaggaaggttctttctgtggtgatgagttactcacctgggcattg
gaccccaagtcaggtgctaatttcccagcttccagcagaaccgttaaggcactcactgag
gttgaggcatttgccttgtgcgccgaggagctgaaatttgtggccagtcagttcaggagg
ctgcacagtaggcaagttcagcacacattcagattctattcccagcaatggaggacttgg
gcggcctgcttcattcaagcggcatggcgccgctactacaagaggaagatggcggagcag
cgccgcaaggaagaagaggcggcaagcaggccaagtagtagccaccctagccttggggcg
accatctacgcatctcgtttcgcggctaacgccatgagaggggttcacagactaagaagc
aaggctgtccccgccattgtcaggctgccaaagcccccagaaccagattttggtgtcgat
gacgctgactaa
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