Panicum hallii (Hall's panicgrass): 112899583
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Entry
112899583 CDS
T07366
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai03082
ATP-dependent chromatin remodeling
phai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112899583
03083 Polycomb repressive complex
112899583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phai03036
]
112899583
Enzymes [BR:
phai01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112899583
Chromosome and associated proteins [BR:
phai03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
112899583
HDAC complexes
Sin3A-HDAC complex
112899583
BRAF-HDAC complex
112899583
REST complex
112899583
SHIP complex
112899583
MiDAC complex
112899583
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112899583
Heterochromatin formation proteins
Other heterochromatin formation proteins
112899583
Chromatin remodeling factors
NuRD complex
112899583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
112899583
NCBI-ProteinID:
XP_025823891
LinkDB
All DBs
Position
7:34084420..34089875
Genome browser
AA seq
430 aa
AA seq
DB search
MLEKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHKKMEIYRPHKAYPIEL
AQFHSADYVEFLHRITPDTQHLYASELTRFNLGEDCPVFDNLFEFCQIYAGGTLDAARRL
NHKSCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDASFTRLFKT
IIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNEIPNNDYIEYFAPDYTLKVANLNMDNLNSKTYLSSIK
VQVMESLRSIQHAPGVQMQEVPPDFYIPDFDEDELDPDERVDQHTQDKQIHRDDEYYEGD
NDNDHDNGTR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctggagaaagaccggatatcctacttctacgacggagatgtgggcaatgtctacttt
gggccaaatcaccccatgaagccacatcgtctttgtatgacgcatcaccttgttctttca
tatggacttcataaaaagatggagatatatagaccacacaaagcatatccaatagagctt
gcccagttccattctgctgattatgtggaattcttgcaccggataactcctgacactcaa
cacctgtatgcaagtgaattaactagattcaatcttggagaagactgcccagtctttgat
aatttgtttgagttctgccaaatctatgctggaggaactttagatgctgctcgcagatta
aatcataaatcatgtgacattgccattaattgggccggtgggctgcatcatgcaaaaaag
tgtgaggcatcaggcttctgctacattaacgatctagttttgggaattctggagcttctc
aagtaccatgccagggttctatatattgacattgatgtccatcatggagatggagttgaa
gaagctttttatttcacagacagggtaatgactgtgagtttccataagtatggtgacctg
ttctttcctggcacgggtgatattaaggatataggagaaagggaaggaaaatattatgcc
atcaacattccacttaaagatgggatagatgatgccagctttactcgtctttttaaaacg
attattgccaaggttgttgagacatatctgcctggtgctattgttcttcaatgtggggct
gattcattggcaagggaccggctgggctgcttcaatctctccattgaaggccatgctgaa
tgtgtaaagtttgttaagaaattcaatattccccttctggtaacaggaggtggtggatac
accaaggagaacgtagcacggtgttgggctgttgaaactggggtccttttagacacagaa
ctcccaaatgagatcccaaacaatgactacattgagtactttgctccagattatacactg
aaagttgcaaatttgaacatggacaatttgaatagtaagacctatctcagttcaatcaaa
gtgcaagtcatggagagtttgcggtccatacagcacgctcctggtgttcagatgcaagag
gttccacctgatttttatatccctgattttgatgaagatgagctggatcctgatgaacgt
gttgatcagcatacccaagacaagcagattcaccgtgatgatgagtactacgaaggcgac
aacgacaacgatcatgacaatggcactcgctga
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