Panicum hallii (Hall's panicgrass): 112901289
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Entry
112901289 CDS
T07366
Name
(RefSeq) syntaxin-related protein KNOLLE-like
KO
K08486
syntaxin 1B/2/3
Organism
phai
Panicum hallii (Hall's panicgrass)
Pathway
phai04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
phai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112901289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phai04131
]
112901289
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phai04147
]
112901289
Membrane trafficking [BR:
phai04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112901289
Exosome [BR:
phai04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112901289
Exosomal proteins of other body fluids (saliva and urine)
112901289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Se-cys_synth_N
PLU-1
Motif
Other DBs
NCBI-GeneID:
112901289
NCBI-ProteinID:
XP_025825953
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All DBs
Position
7:42728179..42729427
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AA seq
311 aa
AA seq
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MNDLMTKSFMSYVDLKKAAMKDLEAGGDGIELPESGVTDERLRGFFQEAEAAKAEMAAIR
DALDRLRAANEEGKALHQADDLRAHRGRVNADIVAVLRRARGIRARLESLDRANAAQRRL
SAGCREGTPLDRTRTAVTAGLRKKLKDLMLDFQALRQRMMSEYKETVERRYYTLTGEVPE
EEVIERIISDGRGEELLGAAVAEHGKGAVLAAVHEIQDRHDAAREVERSLLELHQVFLDM
AVMVEMQGEKLDDIESHVANASHYVQGGNKELGKAREYQRSSRKWLCIGIIILLLLILLV
TVPIATSFRKS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctcatgaccaagtccttcatgagctacgtcgacctgaagaaggcggcgatg
aaggacctggaggcgggcggcgacgggatcgagctcccggagtcgggcgtcacggacgag
cgcctgcgcgggttcttccaggaggcggaggcggcgaaggccgagatggcggccatccgc
gacgcgctcgaccgcctccgcgccgccaacgaggagggcaaggcgctgcaccaggccgac
gacctccgcgcgcaccgcggccgcgtcaacgccgacatcgtcgccgtgctccgccgcgcc
cgcggcatccgcgccaggctcgagtccctcgaccgcgccaacgccgcgcagcggaggctc
tccgcgggttgccgcgagggcacgccgctggaccgcacgcgcaccgccgtcaccgcgggg
ctccggaagaagctcaaggaccttatgctcgacttccaggcgctgcggcagcggatgatg
tccgagtacaaggagaccgtggagcgccgctactacacgctcaccggggaggtccccgag
gaggaggtgatcgagcgcatcatctccgacggccgcggcgaggagctcctgggcgccgcc
gtcgcggagcacggcaagggcgccgtgctcgccgcggtgcacgagatccaggaccgccac
gacgcggcgcgcgaggtggagcgcagcctcctggagctccaccaggtgttcctcgacatg
gccgtcatggtggagatgcagggggagaagctcgacgacatcgagagccatgtcgcgaac
gcctcccattacgtgcagggcggcaacaaggagctgggcaaagccagggagtaccagcgg
agcagccgcaagtggctctgcatcggcattatcatcctgctgctcctcatcctcctcgtc
accgtaccaatcgccaccagcttcagaaagtcttga
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