Polaribacter haliotis: H9I45_14810
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Entry
H9I45_14810 CDS
T06834
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
phal
Polaribacter haliotis
Pathway
phal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9I45_14810 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phal03400
]
H9I45_14810 (uvrA)
DNA repair and recombination proteins [BR:
phal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9I45_14810 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9I45_14810 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
AAA_22
nSTAND3
AAA_21
Viral_helicase1
T2SSE
AAA_24
cobW
DUF1924
AAA_25
MeaB
AAA_18
AAA_15
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QOD60595
UniProt:
A0A7L8AF05
LinkDB
All DBs
Position
complement(3466320..3469142)
Genome browser
AA seq
940 aa
AA seq
DB search
MKDQEYIEVYGARVHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETF
SAYARQFLGGLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLLFARAGD
AYSYNTNEKMVSYSDEQIKELILTDFADKKIAVLAPLIKSRKGHYRELFEQISKQGFLRV
RVDGEIREIEKGMKLDRYKNHDIEVVIDRLAINKSSEKRLDETIKTALYSGNNIMMVIDV
DDNNPRYFSRELMCPTTGIAYPNPEPNTFSFNSPKGACSSCNGLGITNEINLEKVIPDNS
ISIKNGGIVPLGEEKNSWIFKQLQNIAERYKFKLTDAIKSIPKEALDIILNGGNETFEIE
SKTVGVTRNYKIDFEGIVAFIDSQYNNAESTSIKRWAKGFMDEVTCSTCNGKRLKKEALH
FKITDKNISDLAQMDVTELAKWFKNIEKDLSEKQLIIASEILKEIRTRIQFLLDVGLDYL
TLDRTSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNQKLIDSLIKLRDIG
NSVLVVEHDKDMMEHADFVFDIGPGAGRHGGEIVSAGTFKELKKQRTLTSDYITGKREIA
VPKKRREGNGKTIKLKGATGNNLKNVSVEFPLGKMICVTGVSGSGKSTLINETLYPILNA
HIYRGVKKPMPYKKIEGLENVDKVIDIDQSPIGRTPRSNPATYTKTFDEIRSLFAKTPEA
AIRGYKPGRFSFNVKGGRCETCQGGGVRVIEMNFLPDVHVECETCQGKRFNRETLEIRYK
GKSISDVLNMTIEDATDFFELIPKIHRKLKTIKDVGLGYITLGQQSTTLSGGEAQRIKLA
AELSKRDTGNTFYILDEPTTGLHFEDIRVLMDVLNKLADKGNTVLIIEHNLDVVKLADYI
IDVGMEGGKKGGKILVTGTPEEVAEHKTSYTAKFLKKELI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaccaagaatacatagaagtttatggagctagagtccataatttaaaaaatatt
gatgttaaaattccacgcgaaaaactagtcgtaataaccggtttaagtggaagtggtaaa
tcttctttggcttttgatactatttatgctgaaggtcaaaggcgttatattgaaactttt
tctgcatacgcaagacagtttttaggcggattagaaagaccagatgtcgataagattgat
ggactttcaccagtaatttctattgaacaaaaaacgacgaataaaagtccacgttctaca
gttggaaccatcacagaaatttacgattttttaagattattattcgcaagagctggtgac
gcttattcttacaacaccaacgaaaaaatggtgagttattcagatgagcaaataaaagag
ttaattcttactgattttgctgataaaaaaatagctgttttagctccgttaattaaatcg
agaaaagggcattatcgtgagcttttcgagcagatttctaaacaaggttttttacgtgtt
cgagttgatggagaaattcgagaaatcgaaaaaggaatgaaattagatcgttacaaaaac
cacgatattgaggttgtaatagatcgattggcgataaataaatcgtcagaaaaaaggtta
gatgaaaccataaaaaccgccttatattctgggaataatattatgatggtaattgatgtt
gatgacaacaatcctcgttattttagtcgagaattaatgtgtccaacaacaggaatcgca
tatccaaatccagagccaaatacattttcttttaactccccaaaaggtgcttgtagttct
tgtaatggattgggaattaccaatgaaattaatttagagaaagtaattccagataatagt
atttccataaaaaacggagggattgttcctttaggtgaagaaaaaaatagttggattttt
aaacaacttcaaaatattgcggaacgttataaattcaaattaactgacgcaattaaaagt
attccaaaagaagctttagatattattttaaatggcggaaatgaaacttttgaaatagaa
tctaaaactgttggtgttacaagaaattataaaatagattttgaaggaattgttgctttt
atagacagccaatataataatgcagaaagcacttcaataaaacgttgggcaaaagggttt
atggatgaagttacttgttctacttgtaatggaaagcgtttaaaaaaagaagcacttcat
tttaaaattactgataaaaacataagtgatttagcacaaatggatgtgactgaattggca
aaatggtttaaaaatattgagaaagatttatcagaaaaacaactaataattgcttcagaa
atcttaaaagagattcgtactcgtattcaatttttattagatgttggattggattattta
acattagacagaacttctaaatctctttctggtggagaagcacaaagaattcgtttagca
acacaaattggttcgcaattagttggtgttttatatattttggatgaaccaagtattggt
ttacatcagagagataatcaaaaattgatagattccttaataaaattacgtgacattgga
aactctgttttagtagtagaacacgacaaagatatgatggaacatgcagattttgtattc
gatattggcccaggtgcaggaagacatggaggagaaattgtttctgctggaacttttaaa
gaattaaaaaaacaaagaactttaacttcggattatattacaggaaaaagagaaattgct
gttcctaaaaaacgaagagaaggaaatggaaaaaccatcaaattaaaaggtgcaactgga
aataatttaaaaaatgtttctgtggagtttcctttaggaaaaatgatttgtgttactgga
gtttctggaagtggaaaatctacattaattaatgaaactttatacccaattttaaacgct
catatttatagaggtgttaaaaaaccaatgccttacaaaaaaattgaaggtttagaaaat
gtagataaggttattgatatcgaccaatctccaattggaagaactccacgttctaaccca
gcaacatacacaaaaacatttgacgaaattcgaagtttattcgcaaaaactcctgaagct
gctattcgtggttataaacctggtcgtttttcttttaatgtaaaaggcggacgttgtgaa
acttgtcaaggaggaggagttcgcgtcatcgaaatgaattttttaccagatgttcatgta
gaatgtgaaacttgccaaggaaaacgttttaacagagaaactttagagattcgttataaa
ggaaaatctatttccgatgttttaaatatgacgattgaagatgctacagatttctttgaa
ttgattcctaaaatccatagaaaattaaaaacaattaaagatgttggcttaggctatata
actcttggacaacaatctaccacactttctggaggagaagcacaaagaattaaattagca
gcagagctatctaaaagagatactggaaatactttttacattttagatgaacctacaact
ggccttcattttgaagacattcgagttttaatggatgttttaaataaattagccgacaaa
ggaaatactgtactaattatagaacacaatttagatgttgtaaaattagcagattatatt
attgatgttggtatggaaggtggaaaaaaaggtggaaaaattttagttacaggaactcct
gaagaagttgcagaacataaaactagttatactgctaagtttttgaaaaaagagttaatt
tag
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