KEGG   Polaribacter haliotis: H9I45_14810
Entry
H9I45_14810       CDS       T06834                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
phal  Polaribacter haliotis
Pathway
phal03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    H9I45_14810 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phal03400]
    H9I45_14810 (uvrA)
DNA repair and recombination proteins [BR:phal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H9I45_14810 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      H9I45_14810 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 RsgA_GTPase nSTAND1 DnaJ_CXXCXGXG AAA_22 nSTAND3 AAA_21 Viral_helicase1 T2SSE AAA_24 cobW DUF1924 AAA_25 MeaB AAA_18 AAA_15 AAA_23
Other DBs
NCBI-ProteinID: QOD60595
UniProt: A0A7L8AF05
LinkDB
Position
complement(3466320..3469142)
AA seq 940 aa
MKDQEYIEVYGARVHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETF
SAYARQFLGGLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLLFARAGD
AYSYNTNEKMVSYSDEQIKELILTDFADKKIAVLAPLIKSRKGHYRELFEQISKQGFLRV
RVDGEIREIEKGMKLDRYKNHDIEVVIDRLAINKSSEKRLDETIKTALYSGNNIMMVIDV
DDNNPRYFSRELMCPTTGIAYPNPEPNTFSFNSPKGACSSCNGLGITNEINLEKVIPDNS
ISIKNGGIVPLGEEKNSWIFKQLQNIAERYKFKLTDAIKSIPKEALDIILNGGNETFEIE
SKTVGVTRNYKIDFEGIVAFIDSQYNNAESTSIKRWAKGFMDEVTCSTCNGKRLKKEALH
FKITDKNISDLAQMDVTELAKWFKNIEKDLSEKQLIIASEILKEIRTRIQFLLDVGLDYL
TLDRTSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNQKLIDSLIKLRDIG
NSVLVVEHDKDMMEHADFVFDIGPGAGRHGGEIVSAGTFKELKKQRTLTSDYITGKREIA
VPKKRREGNGKTIKLKGATGNNLKNVSVEFPLGKMICVTGVSGSGKSTLINETLYPILNA
HIYRGVKKPMPYKKIEGLENVDKVIDIDQSPIGRTPRSNPATYTKTFDEIRSLFAKTPEA
AIRGYKPGRFSFNVKGGRCETCQGGGVRVIEMNFLPDVHVECETCQGKRFNRETLEIRYK
GKSISDVLNMTIEDATDFFELIPKIHRKLKTIKDVGLGYITLGQQSTTLSGGEAQRIKLA
AELSKRDTGNTFYILDEPTTGLHFEDIRVLMDVLNKLADKGNTVLIIEHNLDVVKLADYI
IDVGMEGGKKGGKILVTGTPEEVAEHKTSYTAKFLKKELI
NT seq 2823 nt   +upstreamnt  +downstreamnt
ttgaaagaccaagaatacatagaagtttatggagctagagtccataatttaaaaaatatt
gatgttaaaattccacgcgaaaaactagtcgtaataaccggtttaagtggaagtggtaaa
tcttctttggcttttgatactatttatgctgaaggtcaaaggcgttatattgaaactttt
tctgcatacgcaagacagtttttaggcggattagaaagaccagatgtcgataagattgat
ggactttcaccagtaatttctattgaacaaaaaacgacgaataaaagtccacgttctaca
gttggaaccatcacagaaatttacgattttttaagattattattcgcaagagctggtgac
gcttattcttacaacaccaacgaaaaaatggtgagttattcagatgagcaaataaaagag
ttaattcttactgattttgctgataaaaaaatagctgttttagctccgttaattaaatcg
agaaaagggcattatcgtgagcttttcgagcagatttctaaacaaggttttttacgtgtt
cgagttgatggagaaattcgagaaatcgaaaaaggaatgaaattagatcgttacaaaaac
cacgatattgaggttgtaatagatcgattggcgataaataaatcgtcagaaaaaaggtta
gatgaaaccataaaaaccgccttatattctgggaataatattatgatggtaattgatgtt
gatgacaacaatcctcgttattttagtcgagaattaatgtgtccaacaacaggaatcgca
tatccaaatccagagccaaatacattttcttttaactccccaaaaggtgcttgtagttct
tgtaatggattgggaattaccaatgaaattaatttagagaaagtaattccagataatagt
atttccataaaaaacggagggattgttcctttaggtgaagaaaaaaatagttggattttt
aaacaacttcaaaatattgcggaacgttataaattcaaattaactgacgcaattaaaagt
attccaaaagaagctttagatattattttaaatggcggaaatgaaacttttgaaatagaa
tctaaaactgttggtgttacaagaaattataaaatagattttgaaggaattgttgctttt
atagacagccaatataataatgcagaaagcacttcaataaaacgttgggcaaaagggttt
atggatgaagttacttgttctacttgtaatggaaagcgtttaaaaaaagaagcacttcat
tttaaaattactgataaaaacataagtgatttagcacaaatggatgtgactgaattggca
aaatggtttaaaaatattgagaaagatttatcagaaaaacaactaataattgcttcagaa
atcttaaaagagattcgtactcgtattcaatttttattagatgttggattggattattta
acattagacagaacttctaaatctctttctggtggagaagcacaaagaattcgtttagca
acacaaattggttcgcaattagttggtgttttatatattttggatgaaccaagtattggt
ttacatcagagagataatcaaaaattgatagattccttaataaaattacgtgacattgga
aactctgttttagtagtagaacacgacaaagatatgatggaacatgcagattttgtattc
gatattggcccaggtgcaggaagacatggaggagaaattgtttctgctggaacttttaaa
gaattaaaaaaacaaagaactttaacttcggattatattacaggaaaaagagaaattgct
gttcctaaaaaacgaagagaaggaaatggaaaaaccatcaaattaaaaggtgcaactgga
aataatttaaaaaatgtttctgtggagtttcctttaggaaaaatgatttgtgttactgga
gtttctggaagtggaaaatctacattaattaatgaaactttatacccaattttaaacgct
catatttatagaggtgttaaaaaaccaatgccttacaaaaaaattgaaggtttagaaaat
gtagataaggttattgatatcgaccaatctccaattggaagaactccacgttctaaccca
gcaacatacacaaaaacatttgacgaaattcgaagtttattcgcaaaaactcctgaagct
gctattcgtggttataaacctggtcgtttttcttttaatgtaaaaggcggacgttgtgaa
acttgtcaaggaggaggagttcgcgtcatcgaaatgaattttttaccagatgttcatgta
gaatgtgaaacttgccaaggaaaacgttttaacagagaaactttagagattcgttataaa
ggaaaatctatttccgatgttttaaatatgacgattgaagatgctacagatttctttgaa
ttgattcctaaaatccatagaaaattaaaaacaattaaagatgttggcttaggctatata
actcttggacaacaatctaccacactttctggaggagaagcacaaagaattaaattagca
gcagagctatctaaaagagatactggaaatactttttacattttagatgaacctacaact
ggccttcattttgaagacattcgagttttaatggatgttttaaataaattagccgacaaa
ggaaatactgtactaattatagaacacaatttagatgttgtaaaattagcagattatatt
attgatgttggtatggaaggtggaaaaaaaggtggaaaaattttagttacaggaactcct
gaagaagttgcagaacataaaactagttatactgctaagtttttgaaaaaagagttaatt
tag

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