Parasphingorhabdus halotolerans: HF685_02420
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Entry
HF685_02420 CDS
T07423
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
phao
Parasphingorhabdus halotolerans
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
QJB68299
UniProt:
A0A6H2DI02
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Position
518410..519996
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AA seq
528 aa
AA seq
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MQAFSELLDRLIYTRSRNAKLRLISEYLKTAPDPDRGWVLAALTEQIDFPKVKISAVRNM
AKDRIDETLFKLSRDFVGDTAETVALIWPETENFVPDNMLSVDNVVTQLSEVSRAQAPML
LANLMDQLDSNGRYALIKFATGAMRIGVSARLAKTAFALAYGIAVEEIEEVWHSLKPPYS
ELFAWGEGKAGKPDLKGVPFFRPFMLAHPLEERTVDLKDYVAEWKWDGIRIQIVGTGNET
RLYSRGGDDITPAFPDVAQAFDAVGVVDGELLVRGDFQGGEAASFNALQQRLGRKKVSKK
MLDDFPAFVRLYDILYDGEHDLRHLQWTKRRQSLETFVPKLDGSRFDISSILEADDFGHL
AQIRDGARDAAIEGVMLKRRDSPYIAGRKTGLWYKWKRDPLVADCVMMYAQRGSGKRSSF
YSDYTFGCWTDDPKNGGELYPVGKAYSGFTDEELKMLDRFVRQNTLNRFGPVREVEKTMV
LEVAFDSIHESKRHKSGLAMRFPRISRIRTDKPADEADMVSTLKAMIT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcattttccgagcttcttgaccggttgatctatacgcgttcgcgcaacgccaaa
ttgcggttaataagcgaatatctgaaaactgcaccggatcctgatcgggggtgggtgctg
gcggcgctcaccgagcaaatcgattttccgaaggttaaaatttccgctgtaaggaatatg
gcgaaagatcgcatcgatgaaacattattcaagctcagtcgggactttgtcggcgatacg
gcggaaaccgtcgcgctgatctggccggaaaccgagaattttgtaccagataatatgttg
tcggtagataatgttgtgacccaattgtctgaggtcagcagagcgcaagcccctatgttg
ctggcgaatttaatggatcaactggattctaacgggcgctatgcgctgataaaatttgca
actggcgcgatgcggattggcgtatctgcgcgcttggcaaaaacagcttttgctctagcc
tatggtattgccgtcgaagaaatagaagaggtttggcattcccttaaacctccttattca
gaactattcgcttggggtgagggtaaagcaggcaagcccgacttgaagggcgtgccgttt
tttcgtcccttcatgctggcccatccgcttgaagaaaggactgtcgacctcaaagactat
gtcgcggaatggaaatgggatggcatccgtattcagatcgttggcacgggcaacgaaacg
cgcctgtatagccgcggcggcgatgatattaccccggccttccccgatgttgcgcaggca
tttgatgctgtcggcgtcgtcgacggtgaattgcttgttcggggcgattttcagggcggt
gaggcggcgagcttcaatgctttgcaacaaagattgggtcggaaaaaagtgtcgaagaaa
atgctagatgactttcctgcattcgtccgtctttatgacatattatacgacggcgagcat
gatttgcgtcatctgcaatggacgaagaggcggcagtcgctggagacattcgtgcccaag
cttgacggttcacggtttgatatttcaagcattttggaagctgatgattttggacatctg
gcccagatcagagacggcgcacgcgatgctgcgattgaaggcgtaatgctcaagcgccgc
gacagtccttatatagcagggcgcaaaactgggctctggtataaatggaaacgcgaccct
ctcgtagctgattgtgtgatgatgtatgcccagcgcgggtctggcaagcgatcatccttt
tattcggattatacttttggttgctggaccgacgatcctaaaaatggcggcgaattatat
cccgtcggcaaggcttattcgggctttaccgatgaggaactgaaaatgctcgatcggttt
gttcgccaaaacaccttgaaccgctttggcccagttcgtgaggtggaaaagacgatggtg
ctggaagtagcattcgattccatccacgaaagcaaacgtcacaagtccggcttggctatg
cggtttccgagaatttcccggatcaggacagacaagccggcggacgaggctgacatggta
tccacgttgaaagcgatgattacctag
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