Parasphingorhabdus halotolerans: HF685_06390
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Entry
HF685_06390 CDS
T07423
Name
(GenBank) autotransporter domain-containing protein
Organism
phao
Parasphingorhabdus halotolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QJB68949
UniProt:
A0A6H2DJU6
LinkDB
All DBs
Position
complement(1330348..1334679)
Genome browser
AA seq
1443 aa
AA seq
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MRNLATGTIIGDIALGGGNDILANQGAITGDVALGTGSDSFIMTAGGSLTGTIDGGDGDD
LFALDGAAGTSATFNHDTIPLSGFERFEKRGAGSWTLAGAGNMTFPTDGLISGGSLFVNG
IYAGLSLQVNAGARLGGTGSVGAATLTGATLAPGNSIGTMTFNGDLTFDGTSTLEIEVND
QGLSDRIIVNGLVNLGGAGLSVLDMNGGSFGGSNPFVYTIIDNDAADAINGVFGSVTNQL
AFLTPSVNYAGGDGNDVVVTLTPNNNPPTNGCTNNTPVANESVTCTGTDTVGIFDAGQVI
TSLPSGVSVDVRPDAIVPHIFLGANATVVTGTGSQILGTTMDNRVIHIEGGSIDIAGTVT
GNAAAILAGSSNMSPTGSTVMIRQPGTVTSNVGAGAIFVQSDNGTIQVDGTIITNGNFFD
ANGNGASVVALADNFSTTIGETGSVTTDGNRVSAVVTRGNDNRISSAGTIITSGDLAAGI
SLIEDGAAGATGGQVMLTSTGQITTSGSQSHGIFVSLGGGSTTTSQITVDGSISTSGTDA
SAIYLTATQNSVGNANILISQGARVFSSQYEVIGEGDTGGTPGIVNTTVTIAGEVARSNA
TDVAIELGTGNDSVILLSTYAITGTIDAGDGDDLFALDGAAGTSAIFNHDNNALANFERF
EKRGAGLWALAGAGNMTFPTNGLISGGTLAVNGTYAGLNLNVQSGGRLGGSGSVGAVTLT
GGTLAPGAGSGSAPTQTAAVHATPVSAVPVAGVSAPTAPIASAPVPAPLPLPPKLSGGML
AEAQRAAGGMITGGENSPHRVNAGNMITGGDNIAHGNLSGNMIAGGENSPHAELIMGGEN
TPHAEIIAGGENTPYAEMISGGENAPFEGFILGGENIALVDGTSIPGAVNVPISTLIQGG
DNSPFAAGQNIGTLTINGDLTFDASSIFEVEVDDQGNSDRVIVFGSVTLGGARLSVLDMI
GGGFMGTDPFNYIIIDNDAMDAVMGIFGNITNELAFLTPTVTYAAGDGNDVQLTLTPNNA
PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPTPTPTPTPTPVPTPTPTPTPPPVVVTP
PAGPLFPTVARTFNQTSAARGLDGFDRTAGSDSNTVYMNVLFTTVPQALQAFDTSSGEIY
PTLLADTLDAGMVRTDRLVARSHESFRDGWGIWGGINGRTGNVDGDGNAAAVSQDDYGFD
IGIDYRGKDNAWAFGASVGYINSDLEITARNSRADSDGWHLGAYGRYGSGGKGVTATAAI
SYSDISSDVMRAIQVNRLSRAATSNVNVTTFAIEGELRYGIESGPGWSMGPVVSIHHASA
DLGRFSENGAQSLNLSSNGGSDKLTRFGGGVFANWQGTKGGLDASAQYVGGSNNFTQVGM
ALDGAPGITFPIRSPRVNNSSGLFTVSGEYELGGGWTIGGNIRSLISKDEKSASGSVNVG
WRF
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtaacttggctactggtacgattatcggcgatattgcgttaggcggcgggaatgac
atcctcgccaatcagggtgcaatcacaggcgacgtcgcactcggaaccggaagcgactcc
ttcataatgaccgctggcgggagccttaccggcacaattgacgggggcgacggggatgat
ctgtttgcactcgatggcgcggcgggtaccagtgcgactttcaatcatgataccatcccg
ttgtccggcttcgaacggtttgaaaagcgcggcgcgggtagctggacgctggcgggggcg
ggcaacatgaccttcccgaccgacggtttgatcagcggtggttcgctcttcgtcaatggc
atttatgcggggcttagcctgcaggtaaatgcgggtgcgcggctgggcggcaccggcagc
gtcggtgcggcaaccctgaccggcgctacgctggcccccggcaacagcatcggtacgatg
acgtttaatggcgacctgacctttgatggcacctcgacgctggagatcgaggtcaatgac
caggggctgagtgaccggatcatcgtcaacgggttggtcaatctgggcggtgcggggctg
agcgtgctcgacatgaatggcggaagttttggcggcagcaatccgtttgtctatacgatc
atcgacaatgacgcggccgatgcaattaacggcgtgtttggtagcgtgacgaaccagctt
gctttcctgacacccagcgtcaactatgcgggcggcgacggcaacgacgtggtggtcacg
ctgacgccgaataacaatcctccaacgaacggctgtaccaacaatactcccgtggcgaat
gagagtgtcacttgtaccggaaccgacacggtgggcatttttgatgccggtcaggtgatc
accagcttgcccagtggtgtttccgttgatgtccggcccgatgcgattgtgccgcacata
ttcctgggcgcgaatgcgaccgtggtgaccggaaccggaagccagattttgggcaccacg
atggacaaccgcgtcattcatattgaaggcggctcaatagatattgcaggtacagtaact
gggaatgccgccgccatcctcgccggttcttccaatatgtcgcctacgggttccactgtg
atgattcgtcaacccggcacggttacatctaatgtcggtgcgggcgcgatctttgtgcag
agtgacaatgggacaattcaggttgacggcacgattataaccaatggcaatttctttgat
gccaatggaaatggggcatctgtggtcgcgctggccgacaatttttccaccaccatcggc
gaaaccggtagcgtaacgaccgacggcaatcgggtgtcagctgtcgtgacgcggggaaat
gacaatcgcatcagctctgctggaacgatcataacgagcggggatttggcagccggcatt
tcactgatcgaggacggtgcggcgggggcaaccggaggacaggtaatgctcaccagcact
gggcagataaccacttcgggaagccagtcgcacgggatttttgtcagtctcggaggcggc
tcaaccacaaccagtcaaatcactgttgatgggtcaatcagcacgagcggcaccgacgct
tcagcgatttacctgacagcaacccagaacagcgtcggcaatgccaatatcttaatttcg
caaggcgcccgcgttttttcctcgcagtacgaagtaattggcgaaggcgatacaggtgga
acacccggtattgtcaacacgacggtaacgattgctggcgaggttgcacgcagcaatgcc
acagatgtggcaattgaactgggtaccggaaatgacagcgtaatcctgctgtcgacctat
gcaatcaccggcacaattgacgccggcgatggcgatgatctgttcgcgctcgacggcgcg
gcggggaccagcgcgatcttcaatcatgacaataatgcgctcgccaatttcgaacgcttt
gaaaaacgcggtgccgggctatgggcgctggcgggcgcgggcaatatgaccttcccgacc
aatggcctgatcagcggcggtactttggcggtgaacggtacttatgccgggctgaacctg
aatgttcaatccggcggacgcctgggtggctccggttcggttggtgcggtcacgctcact
ggcgggacgctggctccgggcgctgggagcgggtctgctccaacacaaacagcggcagtg
catgcaactccggtttcagcagttcctgttgctggcgtgtcggctccgactgcgccgata
gcgagtgctcctgtgcctgcaccccttccgctcccgccaaaactgagcggcggaatgctt
gcagaagcgcagcgggcagcgggagggatgatcaccggcggtgagaactccccgcaccgg
gtcaatgctggcaatatgatcacgggcggcgacaatattgcgcatggcaacctatctggg
aatatgatcgctggcggagaaaatagtccccatgccgagttaatcatgggtggtgaaaac
acgccccacgcagaaataatcgcaggcggtgaaaacacgccttatgccgaaatgatcagt
ggcggtgaaaacgcgccattcgagggcttcatattgggtggggagaatatcgcccttgtt
gatgggacttcaatcccgggcgctgtgaatgttccaatcagcaccttgatccagggtggc
gacaacagcccctttgccgctggccagaatatcggcacgctgacgatcaacggcgatctg
acattcgacgcgagcagcatatttgaggttgaagtcgacgatcagggcaatagcgacagg
gtcatcgtgttcggttcggtaacgctgggcggcgcgagattgtcggtgctcgacatgatt
ggcggcggcttcatgggaaccgatccgttcaactatatcatcatcgataatgacgcgatg
gacgcagtgatgggaatttttggcaatatcaccaatgagctcgcctttctcacccctacc
gtgacctatgcagcaggtgacggcaatgatgtgcaattaacgctgacccccaataacgcg
ccacctccacctccacctccaccaccacctcctcctcctccaccgcctcctccaccacct
cctcctcctcctccaccgccaccgcctcctcctcctccaacgccgactccgaccccgacc
cccacaccggtgccgacacctaccccgacgcccacgcctccgccggtggtcgtaacgccg
ccagcaggacccttgttcccaaccgtggcgcggacatttaaccagacgagcgcagcgcga
ggcttggacggattcgaccggacagcgggcagtgattcaaacacggtctacatgaatgtt
ctgttcaccaccgttcctcaggcattgcaggctttcgatacgtcgtcaggcgagatctat
ccgacgcttctggccgatacgctggacgcagggatggtccgaacggaccggctcgttgcg
cgcagccacgaatccttccgcgatggctggggtatctggggcgggatcaacggccgcacg
ggcaacgtcgatggtgacggcaatgccgccgccgtcagtcaggatgattatggctttgat
attggcattgattatcgcggcaaagacaacgcctgggcctttggtgcatcggttggctat
attaatagcgatctggaaatcactgcgcgcaatagccgcgccgacagcgatggctggcat
ctgggtgcttatggccgatatggttcgggcggcaaaggcgttaccgcaaccgctgcgatc
agctattccgatatcagttccgatgtaatgcgcgccattcaggttaaccgactttcgcgg
gctgccacgtccaatgtcaacgtgacgacgttcgccatcgaaggcgaactgcggtacggc
atcgaatccggtccaggctggtcgatgggacctgtcgtctcgatccatcatgccagtgct
gatttgggtcgcttttccgaaaatggtgcccaaagcctcaacctttcgagcaatggcggc
tccgacaagctaacccgctttggcggcggtgtctttgccaactggcaggggacaaaaggc
ggtctcgatgccagtgcacaatatgttggcggcagcaataattttacgcaggtcggcatg
gcgctggatggtgcaccgggtatcaccttcccgatccgctctccccgagtcaacaattcg
agcggactgttcaccgtctccggcgaatatgaactgggcggcggctggaccatcggcggc
aatatccgcagcctgatcagcaaggatgaaaaaagcgcctcgggcagtgttaacgtcggg
tggagattctag
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