Parasphingorhabdus halotolerans: HF685_07560
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Entry
HF685_07560 CDS
T07423
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
phao
Parasphingorhabdus halotolerans
Pathway
phao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
phao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF685_07560 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phao03400
]
HF685_07560 (uvrB)
DNA repair and recombination proteins [BR:
phao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF685_07560 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HF685_07560 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
SWI2_SNF2
DUF6780
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QJB69155
UniProt:
A0A6H2DMH3
LinkDB
All DBs
Position
complement(1571033..1573213)
Genome browser
AA seq
726 aa
AA seq
DB search
MAKLVIRKGLAEPDTDENFIPYKPVRPEKSEGGRSFELVSDFEPSGDQPTAIKELVEGIS
ADDKDQVLLGVTGSGKTFTMAKIIEHTQRPALILAPNKILAAQLYGEFKNFFPNNAVEYF
VSYYDYYQPEAYVARSDTYIEKESSVNEAIDRMRHSATRSLLERDDVIIVASVSCLYGIG
SVETYSAMIFDLEKEQSVDQRDIIRKLVSLQYKRNDMAFARGTFRVRGDNLEIFPSHYED
MAWRISFFGDEVEEIVEFDPLTGKKGASLNKVRIYANSHHVTPGPTMKQAMEAIKLELAV
RLKELESEGKLLEHQRLEQRTHFDLEMIAATGSCAGIENYSRFLTGRMPGEPPPTLFEYL
PDNALLFVDESHQTVPQIGAMSKGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
VSVSATPGKWEMEQTSGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLINECRKVTAQGYRT
LVTTLTKRMAEDLTEFMHEAGIKCRYMHSDVETLERIELIRDLRLGVYDVLIGINLLREG
LDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERALNETG
RRREKQEEYNKLHGITPQSIKKNIGDIVAHVASKDMVTVPIDDDTAHLVGHNLRSHIESL
EKRMRDAAADLEFEEAGRLRDEIRKLEADELGLPANLQVAQPKGRATEGRPGTRKGKYGR
TQRKMG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactggtaatcagaaagggcttggcggagcccgatacggatgaaaattttatt
ccctacaagccagttcggccagagaaatcagagggcggcaggtcatttgagctggtaagc
gactttgaaccgtcgggcgaccagccaacggcaatcaaggaactggttgaaggcattagc
gcagacgacaaggatcaggttctgcttggtgtcaccggctccggcaaaaccttcaccatg
gccaaaattattgagcacacccagcggcccgccctgattctcgcgccgaataaaattctg
gcggcccagctctatggggagttcaagaattttttccccaataatgcagtcgaatatttt
gtcagctattatgattattaccagccggaagcttatgtcgcccgctccgacacctatatc
gaaaaggaaagctcggtaaacgaagcgattgaccggatgcggcactcggcaacccggtct
ttgctcgaacgcgatgatgtgattatcgttgcctcggtatcctgtctttacggtatcggc
tcggttgaaacctactcggcgatgatctttgatcttgaaaaagaacaatcggtggatcag
cgagatattattcgcaagctcgtatcgttgcaatataagcgcaatgacatggcctttgcg
cgcggcacgttccgggtgcggggcgataatcttgagatattcccatcgcattatgaagat
atggcgtggcggatttcgttttttggcgatgaagtcgaagagatcgtcgaatttgatccg
ctgacgggcaaaaagggcgcgagcctgaacaaagtgcgtatctatgcaaattcccaccat
gtgacgcccgggccgaccatgaaacaggcgatggaagctattaagctcgaactcgccgtt
cgcttgaaagagctggagtccgaaggcaagttgcttgagcatcagcggctcgaacaacgc
acccactttgacctcgaaatgatcgccgcaaccggaagttgtgcggggatcgagaattat
tcgcgctttcttaccggccgtatgcctggcgagccgccaccgaccttgttcgagtatctt
cctgacaacgcgctgttgttcgtagatgaaagccaccagaccgtgccacaaatcggggcg
atgtcaaaaggcgaccaccgccgcaagattacgctcgccgaatatggctttcgcttgcca
agctgcattgacaaccggcccttgcggttcaatgaatgggacgcaatgcgtccgcaaacg
gtcagtgtatcggcaacgccgggcaaatgggaaatggaacagaccagcggcgtatttagc
gagcaggtcattcgccccacgggtctgattgatcccccggtcgagattaaacctgtcgag
gaccaggtggatgatctgatcaacgaatgccgcaaggttacggcgcagggctatcgcacg
ctggtcacgacgcttaccaagcgcatggccgaggatttgacagagtttatgcacgaggcg
gggattaaatgccgctatatgcatagtgatgtcgagacgctggaacggatcgagctaatc
cgcgatctgcggcttggcgtttatgatgtgttgattgggatcaacctgctgcgtgagggt
ctcgatattcccgaatgtggtctggttgcgatactagacgccgacaaggaaggctttctg
cgttctgaaacgtcgctgatccagacgattggccgtgcggcacgaaatgtcgatggacgt
gtcattctttacgccgaccgcatgaccggatcgatggagcgcgccctcaatgaaacaggt
cgccgccgcgagaaacaggaagaatataacaagctgcatgggatcacaccgcaatcgatc
aagaaaaacattggcgatatcgttgcgcatgtggcgtcgaaagatatggttacggtgcca
atcgatgatgataccgcgcatctcgtcggtcacaatcttcgcagccatatcgaaagcctc
gaaaaacgcatgcgcgatgctgcggcggatctggaatttgaggaagcaggacgtctgcgc
gatgaaatccgcaaactcgaagcagacgagcttgggcttcccgctaatctgcaagttgca
caaccgaagggcagggccaccgaaggaaggccgggaacacgcaaagggaaatatgggcgg
acgcagcgaaaaatggggtga
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