Phyllostomus hastatus (greater spear-nosed bat): 123807410
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Entry
123807410 CDS
T07912
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123807410 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phas03400
]
123807410 (LIG4)
Enzymes [BR:
phas01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
123807410 (LIG4)
DNA repair and recombination proteins [BR:
phas03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
123807410 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
ATG17_like
Motif
Other DBs
NCBI-GeneID:
123807410
NCBI-ProteinID:
XP_045677168
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRADKIRYFREFLDSWRKFHDALHKNQNDV
TDSFYPAMRLILPQLEREREAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGQLTIQQVNDILDSIARNNTARRKDLVKKSFLHLISKCSA
LEQKWLIRMIVKDLKLGVSQQTVFSIFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSPFKPMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDIYEYFSRNGYKYTD
QFGTSSQEGSLTPFIHNAFKTDIQMCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEYSDL
QTCYCVFDVLMVNNKKLGHETLKKRYEILSSIFTPIPGRIEIVQKTQAHTNKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKPSSGEKPSVFHTLCRVGSGYTMKELYDLGLKLSKHWKPFHKKAPPSSILC
GTEKPEVYIEPCNSVIVQIKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHFFVGGDDEPQEKKRKAAPKIKKVIGIIEHLKAPNLSNINKVSNIFE
DVEFCVMSGISSHSKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTESCVPWQPHFMIHMCPSTKQHFAREYDCYGDSYFTDTDLNQLKEVFMG
IKSPSEQTPEEMASVIADLEYRYSWDCSPLSMFRHHTIYLDLYTVINDLNSKIEGTRLAI
TALELRFHGAKVVSYLAEGVSHVIIGKDHSRVADFKAFRRTLKRKFKILQEGWVTDSIDK
CELQGENEYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacctcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagataaaatcagatacttcagg
gaatttttagattcttggaggaaatttcacgatgccctacataagaaccaaaatgatgtc
acagactctttttatccagcaatgagacttattcttcctcagctagaaagagagagagag
gcctatgggatcaaagaaactatgcttgctaagctttatatagaattgctcaatttacct
agaggaggaaaagatgctcttaaacttctaaattacagaacacctactggaactcgtgga
gatgctggagactttgcaatgattgcatattttgtgttgaaaccaagatgtttacagaaa
ggacaattaaccatacagcaagtaaatgacattttagactcaattgctcgcaataatact
gccagaagaaaggacttagtaaagaagagttttcttcaccttataagtaagtgttcagca
cttgaacaaaagtggcttatacggatgattgtaaaagacttaaagcttggtgttagtcag
caaactgtattttccatttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcacgatccttcagtaggactcagtgatatttccatc
actttattctctccctttaagccaatgttagccgcaatagcagatattgagcgaattgag
aaggacatgaaaaaccagagtttctacattgaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggtgatatatatgaatacttctcacgaaatgggtataaatatacagat
cagtttggtacttcttctcaggagggttctcttacaccattcattcataatgcattcaaa
acagatatacaaatgtgtatccttgatggtgagatgatggcctacaatcctaatacccaa
acttttatgcaaaagggaaataagtttgatattaaaagaatggtagaatattctgatctg
cagacttgttattgtgtttttgatgtattgatggtcaataataaaaagctaggacatgaa
accctgaaaaagaggtatgaaattcttagtagtatttttacaccaataccaggtagaata
gaaatagtgcagaaaacacaggctcatactaataaagaagtaattgatgctctgaatgaa
gcaatagataaaagagaagagggaatcatgataaaacatcctctatccatttataagcca
gacaaaagaggtgaaggatggttaaaaatcaagccagagtatgtagatggattgatggat
gaactggacatcataattgttgggggctactggggtaaaggttcacgtggtggaatgatg
tctcattttttgtgtgctgtagcagagaagccctcttctggtgaaaaaccatcagtgttt
catactctttgtcgtgttggctcaggttacaccatgaaagaactgtatgatctgggtttg
aagttgtccaaacattggaaaccttttcataaaaaggctccaccaagtagcatcttatgt
ggaacggagaaaccagaagtgtacattgaaccttgtaattctgtcattgttcagattaaa
gcaacagagattgttcccagtgatatgtataaaactggctgcactttgcgttttccacga
attgagaagataagagaagacaaagagtggcatgaatgcatgacgctggatgacttagaa
caacttcgagggaaagcatctggaaagcttgcatctaaacacttttttgttggtggtgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagattaagaaagttattggaatt
atcgagcacttaaaagcacctaacctttctaacataaacaaagtttccaatatatttgaa
gatgtggaattttgtgttatgagtggaataagtagccattcaaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaatccaggcccagacacctactgcgtt
attgcagggtctgagaacataagagtgaaaaacataatttcttcaaataaacatgatgtt
gtcaagcctgagtggctgctggaatgttttaagaccgaaagctgtgtgccatggcagcct
cattttatgattcatatgtgcccatcaacaaaacaacattttgcccgtgaatatgattgt
tatggtgatagttatttcactgatacagatttgaaccaactgaaggaagtgttcatggga
attaaaagtcctagtgaacagactcctgaagaaatggcttctgtgattgctgatttagaa
taccgatattcctgggactgctctcccctcagtatgtttcgacaccacactatttatttg
gacttgtatactgttattaatgacttgaatagcaaaattgagggaacaagattagctatt
acagccttagagcttcgatttcatggagcaaaagtagtttcttatttagctgagggagta
tctcatgtaatcattgggaaggatcatagtcgtgttgcagattttaaagcttttcgaaga
actcttaagagaaagtttaaaattctacaagaaggttgggtaactgattcaatagacaaa
tgtgagttacagggggaaaatgagtatctggtttaa
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