Phyllostomus hastatus (greater spear-nosed bat): 123819494
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Entry
123819494 CDS
T07912
Symbol
MTREX
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
phas
Phyllostomus hastatus (greater spear-nosed bat)
Pathway
phas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123819494 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phas03019
]
123819494 (MTREX)
03041 Spliceosome [BR:
phas03041
]
123819494 (MTREX)
03009 Ribosome biogenesis [BR:
phas03009
]
123819494 (MTREX)
03016 Transfer RNA biogenesis [BR:
phas03016
]
123819494 (MTREX)
Enzymes [BR:
phas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123819494 (MTREX)
Messenger RNA biogenesis [BR:
phas03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
123819494 (MTREX)
Spliceosome [BR:
phas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123819494 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
123819494 (MTREX)
Ribosome biogenesis [BR:
phas03009
]
Eukaryotic type
Pre-60S particles
Helicases
123819494 (MTREX)
Transfer RNA biogenesis [BR:
phas03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
123819494 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
123819494
NCBI-ProteinID:
XP_045695818
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MADAFGDELFSVFEDDSAAAPGSGKDKDKGKWKGPPGPAEKAGKRPDGHLQPEPANVGKT
KRDADFESPDEPVFGKKPRVEESVTEDLSLADLMPRVKVQSVETVEGCTHEVALPADEDY
LPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREK
QRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEV
MREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQ
PCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFSTAMQVLRDAGDLAKGDQK
GRRGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEE
VFSNAIDCLSDEDKKLPQVEHVLPLLKRGVGIHHGGLLPILKETIEILFSEGLIKALFAT
ETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEK
MSPTVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVV
EKVKSSEEQYNRIAIPNEESVVVYYKIRQQLARLGKEIEDYIHKPKYCLPFLQPGRLVKV
KNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSRESLENSATEAAKPAKPDE
RGEMQVVPVLVHLLAAISSVRLYIPRDLRPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDD
MGIQDQGLKRVVQKVEAFEHRMYSHPLHNDPGLETAYTLCERKAQIALDIKSAKRELKKA
RTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSA
EQAAALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSF
KPHLMDVVHTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENK
FAEGITKIKRDIVFAASLYL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccttcggggatgagctgttcagcgtgttcgaggacgactctgccgccgcg
ccgggatccgggaaggacaaggacaaggggaaatggaaggggcctccggggcccgcggag
aaggccgggaagcgtcccgatggccacctgcagcccgagcccgccaacgtcgggaaaacc
aagagggacgcggatttcgagagcccggacgagcccgtcttcgggaagaagcccagggtg
gaggagtccgtaaccgaggacctgagcctggcagacctgatgcccagagtgaaagtgcag
tcggtggaaaccgtcgagggctgtacccacgaggtcgctcttcctgcagatgaagattat
ttaccacttaaacctcgagttggaaaagctgcaaaggaatacccattcattcttgacgct
tttcaaagagaagccattcagtgtgtcgacaacaaccagtctgttctggtgtcggcacac
acgtcggcggggaaaaccgtatgtgccgagtacgccattgccttggccctacgggagaaa
cagcgggtgatcttcaccagccccatcaaggcgctgagcaaccagaagtaccgcgagatg
tacgaggagttccaggacgtgggcctgatgacgggggacgtcaccatcaaccccacggcg
tcctgtctcgtcatgaccacggagatcctgaggagcatgctgtacagaggctctgaggtc
atgcgggaagtcgcctgggtcatatttgatgagatccactacatgagagactcagagcgc
ggcgtggtgtgggaggagaccatcatcctgctccccgacaacgtgcactacgtcttcctg
tcggccaccatccccaacgcccggcagtttgccgagtggatctgccacctgcacaagcag
ccctgccacgtgatctacacggactaccggcccacgcccctgcagcactacatcttcccg
gccggcggggacggcctgcacctggtggtcgacgagaacggcgacttccgggaggacaac
ttcagcaccgccatgcaggtgctccgcgacgcgggggacctggcgaagggcgaccagaag
ggccggcgcggagggacgaaaggaccatcaaatgtgttcaagattgtgaagatgatcatg
gagagaaactttcagcccgtaatcatcttcagcttcagtaagaaagactgtgaagcctac
gcacttcagatgaccaaactggacttcaacacagacgaggagaagaagatggtggaggag
gtgttcagcaacgcgatcgactgcctgtcggacgaggacaagaagctcccacaggtggag
cacgtgctgcccctgctgaagcgcggcgtcggcatccaccacggcggcctgcttcccatc
ctgaaggagaccatcgagatcctgttttccgaagggctgatcaaggccttgttcgcgacg
gagactttcgcgatgggaatcaacatgccggcccggacggtgttatttacaaatgcccgg
aaattcgacgggaaagacttccgatggatctcctccggggagtacatccagatgtccggc
cgcgcgggccggcggggcatggacgacaggggcatcgtgatcctcatggtggacgagaag
atgagcccgaccgtggggaagcagctgctgaagggctcagcggaccctctgaacagtgct
ttccacctgacctacaacatggtcctgaacttgctgcgcgtggaggagatcaaccccgag
tacatgctggagaagtccttctaccagttccagcactaccgcgccatcccgggggtggtg
gagaaggtgaagagctcggaggagcagtacaacaggatagccatccccaacgaggagagc
gtggtcgtctactacaagatcaggcagcagctggcccggctgggcaaggagatcgaggac
tacatccacaagcccaagtactgcctgcccttcctgcagcccggccgcctggtgaaggtg
aagaatgaaggagatgattttggctggggagtggtggtgaatttctcaaagaagtcaaat
gttaagcccaactccggggagctggacccgctctacgtggtggaggtgcttctgcgctgc
agccgggaaagcctggagaactcggcgactgaggcggccaagccggccaagcccgacgag
cggggagagatgcaggtggtcccagtgctggtgcatctcctggccgccatcagcagcgtg
cggctctacatcccccgggacctgcggccgctggacaacaggcagagcgtgctcaagtcc
atccaggaggtgcagaagcggttccccgacggcgtgcccctgctggaccccatcgacgac
atgggcatccaggaccagggcctgaagagggtcgtccagaaggtggaggccttcgagcac
cgcatgtactcgcacccgctgcacaacgaccccggcctggagaccgcgtacacgctctgc
gagcggaaagcgcagatcgcgctggacatcaagtcggcgaagcgggagctcaagaaggcg
aggacggtcctgcagatggacgagctcaagtgccgcaagcgcgtgctgcggcggctgggg
ttcgccacgtcctccgacgtcatcgagatgaaggggcgcgtggcctgtgagatcagcagc
gccgacgagctgctcctgaccgagatgatgttcaacggcctcttcaatgacctgtcggcc
gagcaggcggcggccctgctgagctgcttcgtgttccaggagaactcgagcgagatgccc
aagttaacggagcagttggccggccccctccgccagatgcaggagtgtgctaagcgcatc
gccaaagtctcggcagaggccaagttggagatcgatgaggagacttacctgagctccttc
aagcctcacctgatggacgtagtgcacacctgggccaccggggcgaccttcgcccacatc
tgcaagatgaccgacgtcttcgaaggcagcatcatccgctgcatgcggcgcctggaggag
ctgctgcggcagatgtgccaggcggccaaagccatcgggaacacggagctggagaacaag
ttcgcggaagggatcaccaagatcaagagggacatcgtgttcgccgccagcctctacctg
tag
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integrated database retrieval system
