Pedobacter heparinus: Phep_1918
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Entry
Phep_1918 CDS
T00978
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
phe
Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:
phe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phe02000
]
Phep_1918
Transporters [BR:
phe02000
]
Other transporters
Pores ion channels [TC:
1
]
Phep_1918
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ACU04126
UniProt:
C6XW47
LinkDB
All DBs
Position
2218415..2220478
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AA seq
687 aa
AA seq
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MIRKSSAIRGMNCRFSVFFKAILWLGIFMPLTLFAQEDVVKAKKADSIDKVNQLKEVQIR
TIKIGRRQTSSTPLQILSGEELQRLNSLSVADAVRYFSGVQLKDYGGIGGLKTINVRSMG
TNHTAVFYDGVQLGNAQNGQVDLGKFSLDNIAEIELYNGQKSTIFQSAKGFAAGSSLYIN
STQPDFEDGRSDKWKATLKGGSFGLIDPSVLWQHKISESIYSSLSAEWKKASGRYKFRVR
NYGYDTTAVREDGGIETMRLELGLNGVLPDSSLWTVKLYGYNDKQGLPGAIVNNVWRFPQ
RMWNRNFFAQSTFKKDLHKYHLLAAVKYANDYTKYLDPNYVKDTGFLTNIYKQQELYFSL
ANRYQLSSFWDIVLSGDYQWNTLDANMDRFPYPTRYTGLLALATEIHLDRLNIQANLLGT
LVNDEVERYFSAGNKRELKPSVMVSWQPFSLKEFRLRGFYKDIFRMPTFNDLYYTLLGNT
FLKPEYAKQYDLGFTYIRLIDNHLLNQISIQSDVYYNKIRNKIVAVPGANLFTWSMQNLG
LVEIRGLDVNIQTGWRIADQLMVNTGITYTYQKALNMTDVNLNYKNQIPYIPVHSGSFTA
GADWRNLGLNYSYIYTGERYDQSANIIENYVQPWYTHDIAFHYHKDLKHARVKVSVEVNN
LLNQDYEVVTNFPMPGRSYRFTLSYAY
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgataagaaaatcaagtgccatacgtggcatgaattgtcgtttctctgttttttttaaa
gctatactttggctggggatttttatgccccttactttgtttgcccaggaggatgtggtt
aaggctaaaaaagccgattctattgataaggtaaaccaacttaaagaagtacagatcaga
accataaagattggcaggaggcaaacttcatctacacctttacaaatcctttcgggcgaa
gagttgcaacgcctgaacagtttatcggtagccgatgccgtcaggtatttttcgggggta
cagttaaaagattatggtggcattggtggcttaaaaaccatcaatgtgcgcagcatgggt
accaaccatactgctgttttttacgatggggtacaattgggcaatgcacagaacgggcag
gtcgacctgggaaaattttcattagacaacatagccgaaattgagctgtataacgggcaa
aagagtaccatatttcaatcggcaaaaggctttgctgccggaagttcattgtatataaac
tcaacgcagcctgattttgaagatgggcgcagtgataaatggaaagccacattaaaaggt
ggttcatttggcctgatagatccttctgtgctttggcagcataaaatcagcgaaagcata
tacagttccttaagtgccgaatggaaaaaagcaagtggccgttacaagttcagggtaagg
aattacggttatgataccacagcagtaagggaagatggtgggattgagaccatgcggctt
gagcttggactgaacggggtattgccggatagcagtctgtggacggttaagttgtatgga
tacaatgacaaacagggcttgccaggggccatagtaaataatgtatggcgttttccgcag
agaatgtggaacagaaacttttttgcgcagtcgaccttcaaaaaagacctgcacaaatat
catcttttggctgctgttaaatatgctaacgattataccaaatatcttgatccgaactat
gtaaaagatactggctttctgacaaatatctataaacagcaggagctgtatttttcgctg
gccaaccgttaccagctcagttcattctgggatatcgttttgtcgggcgattaccaatgg
aacactttggacgccaatatggatcgttttccatatcctaccaggtatacgggcctgctg
gccctggctaccgaaattcatttggacaggttaaatattcaggccaatttgctgggcaca
ctggttaatgatgaggtagaacgctatttttctgcgggtaataaaagggaacttaagccc
tctgtaatggtttcctggcagcctttcagcttaaaggaatttcgtttacgcggattttat
aaggatatattcaggatgcctacttttaatgacctgtattataccctattggggaacact
ttcctgaaaccggaatatgcaaaacaatacgatcttggatttacctatatcaggttgatt
gacaatcatttgctgaaccagatcagtatacagtcggatgtatattacaacaagatcaga
aataagattgttgcagttccaggggccaatttgtttacctggagcatgcagaacctgggg
ttggtagagatcaggggcctggatgtgaatatacagaccggctggcgtattgccgatcag
ctgatggtcaacaccggtattacctatacctatcagaaggctttgaacatgacagatgtg
aacctgaactataagaaccagatcccatatattcctgtacatagtggttcctttactgct
ggtgccgactggagaaacctgggtctgaactacagttatatctatacgggcgagcgttat
gatcaaagtgccaatattattgaaaattatgttcagccctggtacacccatgatattgcc
tttcattaccataaagatctaaaacatgcccgtgttaaagtatcggtcgaggtaaacaac
cttttgaatcaagattatgaagtggttaccaattttccaatgccgggccggtcgtatcgt
ttcaccttatcttatgcttactga
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