Prevotella herbatica: prwr041_22760
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Entry
prwr041_22760 CDS
T08008
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pher
Prevotella herbatica
Pathway
pher03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
prwr041_22760 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pher03400
]
prwr041_22760 (uvrB)
DNA repair and recombination proteins [BR:
pher03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
prwr041_22760 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
prwr041_22760 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_5
Motif
Other DBs
NCBI-ProteinID:
BCS86383
LinkDB
All DBs
Position
complement(3073776..3075818)
Genome browser
AA seq
680 aa
AA seq
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MDFKLTSKYSPTGDQPEAIKQLTEELQQGAPAQVLLGVTGSGKTFTVANVIANINKPTLI
LSHNKTLAAQLYEEMKGFFPNNAVEYYVSYYDYYQPEAYLPSSDTYIEKDLAINEEIDKL
RLSTVSALLSGRKDVVVVSSVSCIYGMGGPAAMQESVIKIKKGQTIDRNEFLRQLVSALY
VRNDIELQRGNFRVKGDTVDIFMAYSDNALRVTWWDDEIDSIEEVDSITFHTFTSFEEYE
IYPANLFVTTKEQTELAIRQIQDDLTKQVNYFSEIGDNIKAQRIKERVEYDMEMMKELGH
CSGIENYSRYFDGRNAGERPYCLLDFFPKDYLMVIDESHVSVPQISAMYGGDRARKQNLV
EFGFRLPAAFDNRPLRFEEFHELINQIIYVSATPANYEIEEAEGVVVEQIIRPTGLLDPE
IDVRPSENQIDDLMDEILTRCNKNERVLVTTLTKRMAEELTEYLLNHDVKANYIHSDVAT
LDRVRIMNDLRAGVYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNVNGRVIMYADKITDSMQRTIDETARRRSIQLKYNQDHNITPQQITKKIGSSLAMGND
TNNASGRGGNNIAPNAYIEPEYGTFAADTIVKHMSHDELQRSIDNTTELMKMAAKNLDFI
QAAQYRDEIIRLQDQLKLKE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaactaacttcaaaatatagtccaaccggagatcagccggaagctataaaa
caattaactgaagaattacaacaaggagcacctgctcaagtacttcttggagtgacagga
tcaggaaaaacgtttacagtagctaatgttattgccaacataaacaagcctacccttata
ttaagccacaacaagactcttgcggcacagctttatgaagaaatgaaaggattttttcca
aataatgctgtggagtattacgtatcatattatgactattaccagccagaggcttatctg
ccatcttctgatacatacatagaaaaggatcttgccataaatgaagagattgacaaactg
agattgagtactgtttctgccttattgtcaggacgcaaggatgttgttgtcgtgtcttct
gtatcatgcatatatggtatgggcggtccagcagccatgcaggaaagcgtaataaaaata
aaaaaaggacagactatagaccgcaatgaatttttgcgacaattagttagtgctctctat
gtaagaaatgatattgaattgcaacgcggaaacttcagggtaaaaggtgatacagttgat
atctttatggcctatagcgacaacgctcttagggtgacatggtgggatgacgaaattgac
agcatagaagaagttgacagcattacatttcatacctttacatcatttgaagaatatgaa
atatatccagcaaatctttttgtcacgacgaaagaacagactgaactagccataagacaa
attcaagatgatcttacaaagcaagtaaactactttagcgaaataggagataatattaag
gctcagagaattaaagagagagtagaatatgatatggaaatgatgaaagagctcggtcac
tgtagtggaatagaaaattattcaagatattttgatggcagaaatgctggagaaagacct
tactgccttttggactttttccctaaagattacctaatggttattgatgaaagtcacgta
agcgttccacaaatcagcgctatgtatggtggagatagagccagaaagcaaaatcttgtt
gaatttggtttcagacttccagctgcatttgacaaccgtcctttgagatttgaagaattc
cacgaattaataaaccaaattatttacgttagtgccactcctgccaactacgaaattgag
gaagctgaaggtgttgtcgttgagcagattatacgacctacaggattacttgatccagaa
atagatgtcagaccatctgaaaatcagattgacgaccttatggacgaaatccttactaga
tgcaacaaaaatgagagagttcttgtaactacattgacgaaacgaatggcagaagaactt
acagaatatcttttgaaccatgacgtaaaggccaattatatacatagtgatgtggcaact
cttgacagagtaagaataatgaatgatttaagagctggtgtttatgatgttcttgttggt
gtaaacttacttcgtgaaggacttgatttgccggaggtttcattagttgcgattctcgac
gcagacaaagaaggatttctgagaagtcacagaagtttgactcagacagccggacgtgca
gcacgaaatgtcaacggaagggttattatgtatgcagacaaaataactgatagtatgcaa
cgtactattgacgaaactgcaagacgacgtagcattcagcttaaatataatcaagaccac
aatattactcctcagcagattaccaagaagattggttcatcactagcaatgggcaatgac
acgaacaatgcttcaggtaggggtggtaacaatatagcaccaaacgcatatattgaacct
gagtacggtacttttgctgcagatacaattgtgaaacacatgtcacacgatgaactgcaa
cgaagtatagacaacacaacggagttaatgaaaatggctgctaaaaatcttgacttcatt
caggctgctcaatatagagatgaaattataaggttgcaagaccagctaaaattaaaggag
taa
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