Prevotella herbatica: prwr041_23600
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Entry
prwr041_23600 CDS
T08008
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pher
Prevotella herbatica
Pathway
pher00260
Glycine, serine and threonine metabolism
pher00460
Cyanoamino acid metabolism
pher00630
Glyoxylate and dicarboxylate metabolism
pher00670
One carbon pool by folate
pher00680
Methane metabolism
pher01100
Metabolic pathways
pher01110
Biosynthesis of secondary metabolites
pher01120
Microbial metabolism in diverse environments
pher01200
Carbon metabolism
pher01230
Biosynthesis of amino acids
pher01240
Biosynthesis of cofactors
Module
pher_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pher00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
prwr041_23600 (glyA)
09102 Energy metabolism
00680 Methane metabolism
prwr041_23600 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
prwr041_23600 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
prwr041_23600 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
prwr041_23600 (glyA)
Enzymes [BR:
pher01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
prwr041_23600 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
Lipoprotein_16
Motif
Other DBs
NCBI-ProteinID:
BCS86467
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Position
complement(3161957..3163237)
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AA seq
426 aa
AA seq
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MERDLEIFNLIEKEHQRQLKGMELIASENFVSDEVMAAMGSYLTNKYAEGLPGKRYYGGC
QIVDQVEDLARERVKKIFGAEFANVQPHSGAQANAAVLLAVLKPGDTFMGLNLDHGGHLS
HGSHVNTSGILYNPIGYNLNKETGRVDYDEMEKLAIENKPKLIIGGGSAYSREWDYARMR
KIADEVGALLMIDMAHPAGLIAAGILENPVKYAHIVTSTTHKTLRGPRGGIILMGKDFDN
PWGLTNKKGELKKMSMLLNSAVFPGTQGGPLEHVIAAKAVAFAENLQPSWKDYAIQVKKN
AAALADDLMQRGFGIVSGGTDNHSMLVDLRSKYPDLTGKVAENALVAADITANKNMVPFD
SRSAFLTSGIRLGSAAMTTRGAKEDMMHLIAELIEEVLNDPENDKVIARVREKVNATMKD
YPLFAY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagatctggagattttcaaccttattgagaaagaacatcagcgtcagctgaaa
ggtatggaacttatagcatctgaaaactttgtcagtgacgaagttatggcagctatggga
tcatatctgactaacaagtacgcagaaggactacctggcaaacgctattatggtggttgc
caaatcgtcgaccaggttgaagatctggcacgtgagcgcgtaaagaaaatatttggagct
gaatttgctaatgttcagccacattctggagcacaagccaacgctgccgttctgttggct
gttttgaaacctggtgacacatttatgggtttgaatcttgatcacggcggtcacttatca
catggtagtcatgttaatacttcaggtattctttataatcctatcggttataatctaaac
aaggaaacaggtcgtgttgattatgatgaaatggaaaagctggctattgaaaacaagcca
aaattgattatcggtggtggttctgcatatagtcgcgaatgggattacgcccgcatgcgc
aaaatagctgatgaagttggcgcattattaatgattgacatggcacatcctgcaggtctt
attgctgctggaatacttgaaaacccggtcaaatatgctcatatcgtaacaagcactact
cacaaaactcttcgtggtcctcgtggtggtatcatcttaatgggtaaagattttgataat
ccttggggactaacaaataagaaaggtgaattgaagaagatgagtatgcttcttaattca
gccgtattcccaggaacacaaggtggccctcttgagcatgttatagcagccaaagctgtt
gccttcgctgagaaccttcagccttcatggaaagattatgccatacaagttaagaaaaat
gcagcagcccttgctgatgacttgatgcaacgtggtttcggcattgtaagtggtggtaca
gacaaccactctatgcttgttgacttgcgttcaaaatatccagatcttactggtaaggtt
gcagaaaatgcacttgttgcagcagatatcaccgcaaacaagaacatggtgccatttgat
tcaagatcagctttcctaacatctggtattcgacttggttcagcagccatgacgacacgt
ggtgcaaaagaagatatgatgcatcttattgcagaactgatcgaagaggttcttaacgac
cctgaaaacgataaagttattgctagagttagagaaaaggttaatgcaacaatgaaggat
tatcctttgttcgcttattaa
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