Pseudomonas hydrolytica: NLY38_18415
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Entry
NLY38_18415 CDS
T08519
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
phf
Pseudomonas hydrolytica
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phf03000
]
NLY38_18415
Transcription factors [BR:
phf03000
]
Prokaryotic type
Other transcription factors
Others
NLY38_18415
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
PAS
AAA_5
PAS_8
Mg_chelatase
AAA_2
HTH_AsnC-type
PAS_4
AAA
AAA_16
ACT
ACT_4
MLTR_LBD
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UTH30397
LinkDB
All DBs
Position
3926129..3927649
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AA seq
506 aa
AA seq
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MRIHVSFIDRVGITQEVLALLGGRNLNLDAVEMVPPNVYIDAPTLSAAVLEELRGALLQV
HGVQSVEVVDILPGQRRRLQLDALLAAMPDPVLAVDDRATVLLANPALVELCGRTPEGLS
IAALFADDALQQSLLAAGFHQPLREVHFAGQPLLLDAQPITEDGRLTGGLLTLYAPSRMG
QRLAALHHDHAEGFDSLLGESAPIRALKARALRVASLDAPLLIHGETGTGKELVARACHT
VSVRRNAPFLALNCAALPENLAESELFGYAPGAFTGAQRGGKPGLLELANQGTVFLDEIG
EMSPYLQAKLLRFLSDGSFRRVGGDREVKVDVRILSATHRDLEKMVAEGSFREDLFYRLN
VLNLEVPPLRERGQDILLLAQHFMAQACAQIQRLPCRLAPTTFPALLAGRWPGNVRQLQN
VIFRAAAICDSNWVEMDDLDIAGTEVAPKVEGEVTSLEQAMDEYEKALLEKLYDSHPSSR
QLAARLGTSHTAIAKRLRKYGIPGKH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccacgtcagcttcatcgaccgcgtcggcatcacccaggaagtcctggcgctg
cttggcgggcgcaatctgaacctcgatgcagtggagatggtaccgccaaacgtctacatc
gacgcaccgaccctgagcgccgcggtgctcgaggagctgcgtggcgcgctgctgcaggtg
catggcgtgcagagcgtggaggtggtggacattctgcccggccaacgtcgccgcctgcag
ctcgatgccctgctcgcggccatgcccgacccggtgctggcggtggatgaccgcgccacc
gtgctgctggccaacccggcgctggtggagctgtgcggccgcacgcccgaaggcctgagc
atcgccgcgctgttcgccgatgacgcactgcagcaatcgctgcttgccgccggtttccac
cagccgctgcgcgaggtgcatttcgccggccagccgctgctgctcgacgcccagccgatc
accgaagacggtcgcctgaccggtggcctgctcaccctttacgcaccaagccgcatgggc
cagcgcctggccgccctgcatcacgaccatgccgaaggcttcgactcgctgctcggcgag
tccgctccgattcgcgcgctcaaggcccgcgccctgcgcgtggcgtcgctggacgcgccg
ctgctgatccacggcgaaaccggtaccggcaaggagctggtggctcgcgcctgtcatacc
gtcagcgtgcgccgcaatgcgcccttcctcgccctgaactgcgccgccctgccggagaac
ctggccgagagcgaactgttcggctacgcccccggcgcctttaccggcgcccagcgcggc
ggcaagccggggctgctggagctggccaaccaaggcacggtgtttctcgacgaaatcggc
gaaatgtcaccctatctgcaggccaagttgctgcgctttttgagcgacggcagcttccgc
cgcgtcggtggcgaccgcgaggtgaaggtggacgtgcgcatcctcagcgccacccaccgc
gacctggaaaagatggtggccgaaggcagcttccgcgaagacctgttctaccgcctcaac
gtgctcaatctggaagtgccgccgctgcgcgagcgcggccaggacatcctgctgctggcc
cagcacttcatggcccaggcctgcgcgcagatccagcgcctgccctgccgcctggcgccg
accaccttcccggcgctgctggccgggcgctggccgggcaacgtgcgccagttgcagaac
gtgatcttccgcgccgccgcgatctgcgacagcaactgggtggagatggacgatctggat
atcgccggcaccgaagtggcgccgaaggtggaaggggaagtcaccagcctggaacaggcc
atggacgagtacgagaaggcgctgctggaaaagctctacgacagccacccctccagccgc
cagctggccgcacgcctgggcacctcacataccgccatcgccaagcgcctgcgcaagtac
gggataccgggcaagcactga
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