Pseudomonas hydrolytica: NLY38_23680
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Entry
NLY38_23680 CDS
T08519
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
phf
Pseudomonas hydrolytica
Pathway
phf00521
Streptomycin biosynthesis
phf00523
Polyketide sugar unit biosynthesis
phf00541
O-Antigen nucleotide sugar biosynthesis
phf01100
Metabolic pathways
phf01110
Biosynthesis of secondary metabolites
phf01250
Biosynthesis of nucleotide sugars
Module
phf_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NLY38_23680 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NLY38_23680 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NLY38_23680 (rfbC)
Enzymes [BR:
phf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NLY38_23680 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UTH31396
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Position
5024483..5025031
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AA seq
182 aa
AA seq
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MKVIATALPEVLILEPQVFGDERGFFYESFNARRFAEATGVNREFVQDNHSRSARGVLRG
LHYQLQQAQGKLVRVSAGEVYDVAVDVRRSSPNFGKWVGVHLSAENKRQLWVPEGFAHGF
LVLSEYAEFLYKTTDYYAPAHERCIRWDDAHLAIDWPLDGLTPQLSAKDQQGLSLQDAET
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtcatcgcaactgcactaccggaagtgctgattctcgaaccccaggtattcggc
gacgagcgcggcttcttctacgaaagcttcaacgcgcggcgttttgccgaagccaccggg
gtgaaccgcgaattcgtccaggacaaccactcgcgctcggcgcgtggggtgctgcgcggc
ctgcactatcagttgcagcaggcccagggcaagctggtgcgggtcagcgctggcgaggtc
tatgacgtggcggtggatgtgcggcgcagctcaccgaacttcggcaaatgggtcggcgtg
catctgtcggccgagaacaagcgccaactatgggtgccggagggtttcgcccatggtttt
ctggtgctcagcgagtacgccgagttcctctacaagaccaccgactactacgcccccgcc
catgagcgctgcatccgctgggatgatgcgcacctggccatcgactggccgctggacggg
ctgacgccgcaattgtcggccaaggaccagcagggcctaagcctgcaggacgccgagaca
ttcgcatga
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